Gene Information

Name : SARI_03420 (SARI_03420)
Accession : YP_001572391.1
Strain : Salmonella enterica RSK2980
Genome accession: NC_010067
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3348521 - 3349912 bp
Length : 1392 bp
Strand : -
Note : 'KEGG: pfa:PFL1155w 0.0032 GTP cyclohydrolase I K01495; COG: NOG07819 non supervised orthologous group; Psort location: plasma membrane, score: 23'

DNA sequence :
GTGAAATCTATAAATAAGTATCGCTATTTCTTTACCTGTTTCCTTATCGCAATAATTCCTTTTATTGCTTTGTCTTTTGA
TGGGATTAGGGGTTACGTTTTTGATAATTTCATGGTATCTGCGATCTATAACAGTGTTATTATCGCTATCTATATTATGG
GATCTGTATGCACATTATTTACCGTATTTAAAAATTGCGACGCAAGAGAAATTTTAAATACCAATAATGCCAATAAAAAA
AGCTCTACACTTTCCAGTCTTAATCAGGTCATTTTTGCTGATGATTTCATGAAGTGTGATTCCAATTTATTAATAGAGTT
AGATGATAGTGTGTCGACAGCTCGTAATCAACGATTATCATTTATTATGAGTTGTAGTAATGTCTCTACTCTAATTGGTT
TATTAGGAACATTTGCAGGTTTGTCTATTACTATTGGATCAATAGGCAATCTATTGAGCACCCCATCAGGAGTTGGTGGA
GAAAGTTCCAGTAATACTTTACATATGATTGTTACGATGGTGGCATCGCTTTCTGAACCATTGAAAGGAATGAATACTGC
TTTTGTTTCATCTATCTATGGGGTTGTGTGTGCTATTCTTCTAACATCCCAAAGTGTTTTTGTTCGTAGTTCTTATGCTC
TTATTTCTGCTGAGATTAAGAGATTAAAAGTAAAAAGAAGTCGGGCAAGTAGTAATCGACAACGAAGCTTACGGATAGAA
TCAGAGACACTTTTCGAATTTAAGGAACTATTTAGAGAGTTTTTCGACAACTATAAATCCATTGAACTTTCACGCACCCA
AGCAGAAGAAAAAAAACTGACGGTTTTTTCTGATGGCCTATCCAGCTTACAGAATAAATTATCTGATAATACTGTGATAT
TAGAACAGCTTTCTAAACAGGTTGATAATTATATAAATATTAGTAATAAGCATTACATCCAAATTTCTGACAACATGGAT
AATGTTGCAGAACATTTATCGAAAGGTAATGCCTTAATTTCTGAAAATAACGTGATGTTAGCTCAATTAAACCATACACA
AGACTCTATAGATAAAAAGAACGATACAGTAATTGCATCACTTGATAGATGTCATCAGGAATCTGTTTCCCAAAGAAAAA
CCATAGATAGTATTGCTATCGAAAACGTAAAGGTTACTCACCTTGTCACAGAGATGAAAGCTGCCATAGATGAGGATAGT
AATAATATTCATTCAGCGTTATCCAACTTATCTGCTGCAGATGAAAAAATTATTGATAGAACAAAAATGATAGGTGCTGA
AATAGTTAGTTATCGTGAAACATATATCCCATTAATGGAAAAAATAACGTTGATGCATCAGAAATTATTAAAGCAGAGCT
TATTACATGATGAGGTAAAAAATGAAGATTAA

Protein sequence :
MKSINKYRYFFTCFLIAIIPFIALSFDGIRGYVFDNFMVSAIYNSVIIAIYIMGSVCTLFTVFKNCDAREILNTNNANKK
SSTLSSLNQVIFADDFMKCDSNLLIELDDSVSTARNQRLSFIMSCSNVSTLIGLLGTFAGLSITIGSIGNLLSTPSGVGG
ESSSNTLHMIVTMVASLSEPLKGMNTAFVSSIYGVVCAILLTSQSVFVRSSYALISAEIKRLKVKRSRASSNRQRSLRIE
SETLFEFKELFREFFDNYKSIELSRTQAEEKKLTVFSDGLSSLQNKLSDNTVILEQLSKQVDNYINISNKHYIQISDNMD
NVAEHLSKGNALISENNVMLAQLNHTQDSIDKKNDTVIASLDRCHQESVSQRKTIDSIAIENVKVTHLVTEMKAAIDEDS
NNIHSALSNLSAADEKIIDRTKMIGAEIVSYRETYIPLMEKITLMHQKLLKQSLLHDEVKNED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mac YP_219124.1 methyl-accepting chemotaxis protein Not tested SPI-4 Protein 3e-136 66
siiB CAE11794.1 putative inner membrane protein Virulence SPI-4 Protein 7e-135 65
STY4453 NP_458555.1 putative integral membrane protein Not tested SPI-4 Protein 2e-134 65
STM4258 NP_463123.1 methyl-accepting chemotaxis protein Not tested SPI-4 Protein 9e-135 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SARI_03420 YP_001572391.1 hypothetical protein VFG0578 Protein 4e-135 65