Gene Information

Name : SARI_03416 (SARI_03416)
Accession : YP_001572387.1
Strain : Salmonella enterica RSK2980
Genome accession: NC_010067
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG2274
EC number : -
Position : 3321746 - 3323812 bp
Length : 2067 bp
Strand : -
Note : 'KEGG: reh:H16_B0690 7.1e-51 rtxB2; ABC-type RTX toxin transporter, ATPase and permease components: Prot1E family; COG: COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain; Psort location: plasma membr

DNA sequence :
ATGGATACAAAGCTAGAACCATATTATTTAAGTGCAGAAAATGCATTGTCTATAGTTTCAAAAAAATTCAATATAAAAAT
AGACATTAAAGAGGAAGATATAAATATTCGATTTAAAAAATATGATAGAAATAATACCGATGACTCAATACAAATGAAGA
ATTTTTTCTTGTCATTAGGACTTTCTTTACAGGATATATTATTTAGTAGTGGCGAAGATCTATTAAATGAACCTATGCCC
ATTTTACTACTGACCCCTGAAATGAAATGGATGGTATGTATCAGCGGTGGGCAAAAAATTAAATTAGTAAATGCCCGAGG
GGAACTGTGTTATGTAGAGATACCTGATGAGTATCTAAAAAAACTATCTGCATTTAGTATACTTCCCTTAAATAAAGTTG
TTGATAGTATAAGAGTGAATAATATTATTAAAAACTCTTTATCAATGAACAAGGTTTTTTATACAAAATACTTTTTTTCA
TCTTTGTTTATGGCAATTTTTGCGCTGACAATTCCAGTTTTTAGTAATTTGTTTTATGACAAGCTTATTCCAAGTGCTTC
TGTTTCGTCTTTATTTGGTGTCGCTATTATTGTAGCTGTATTTATCGTTTTTGAGTTTATTCTACGTACGTCAAAAGATA
TTTACCAATCTATAACGGCCAGACAAGATGACGTCGATATTGATATCTCGTTTCTCGAGGCGGTGCTTTATGGTAAAAAG
AAAAACGGTAAATCAATGTCATCAGCATTTGTTCTGTGGAATGAGTTTCAGAAGGTTAAACCTATTTTATTGAATTCTGT
TTTTCAACGTATAGCCGATATCCCAATTTTTTTGATATTTATCGCTGTTATTTATGTGAATTTAGGATGGGTAGTGGTTG
TTCCCATTATTGTTTTTATAATCTCTATTATTTTGTCCATTGTTAACCATCATTATACCAATGAGTTGATGAATAAACAA
AAAGAAGGCCAAAAGAACAGAAATGTTTTCATATCGGAAGTGTTTTTATCAATTAAAATGATCCATACATTAAACAATCA
GGGCTTACTATTTGATTGGGTTAATACATCAAACGAACAGTCATATCTTAATCTTAAGATAAGAAAGCTAAATCTTATCT
ATCAATCAATATTAGGAAGTATGTCATCTATTACTCAAATAACAATAATGATAATAGCTTTTTTTATGGTAATTAAAGGT
GATATTACCACTGGTGCAATTGTATCTTCAGTTATCGTTTCTGGACGTATCTCGGGGATCACCTCCAACTTTTCATCTAC
ATTAATCTCTATATTGTCAGCAGAAAAAACGGGTAAGGACTTGCTTTCTTTCTTTGATGAAGATCAGGAAGAAAAGACAC
CAGCGTTACAGTCAATTTCAAAGTGTGAGGGTGAGATTTCTATTCGTGGTGTTAGCTACCAATATGATGCGCAATCTTCA
GTTATTATTAACCGTTTATCTATAGACATTCCTTCCGGACAACGAGTTGCAATTATAGGTGATTGTGGCGCAGGGAAAAG
TTCATTATTGGGGCTGTTATCTGGCTACCTTTCACCTACAGATGGTGCCATTTTGTACGATGGGTATAATCTAGGGCACC
TCTCCCAGAATTTTTTCTCACAACATTTAAGTGTCGTTACAACCCATGATGTTTTGTTTACTGGGACTGTTGAAAGTAAT
TTTGCATTAAAACCACAAAATGACAGGGGACGGGTATTGAAAGCTCTTCATATAACGAATTGTGGTTTCATTTTACAGCA
TCCTATGGGGTTAAAGTTTCCTGTAAACTTTATGGCTAAAAACCTTTCGTCTGGCCAGCAACAGCAATTATTATTAGCTC
GTAGTTTAAGTAGTGATGCTAGTGTGTTTTTGTGGGATGAGCCAACATCAAATTTGGATGAGAACACAGAAAAACAAATT
TTTGATAACCTGGATGAGTTTATTCAAGGGAACACACTCATTATGATTACTCACCGTCGTTATCTTATAAAATACTTTGA
TAGAGTATTGGTGATGAAAGGGGGAAAAGTGATTCGGGATTGCACTCCTGAAAAATTAATGGGTTAA

Protein sequence :
MDTKLEPYYLSAENALSIVSKKFNIKIDIKEEDINIRFKKYDRNNTDDSIQMKNFFLSLGLSLQDILFSSGEDLLNEPMP
ILLLTPEMKWMVCISGGQKIKLVNARGELCYVEIPDEYLKKLSAFSILPLNKVVDSIRVNNIIKNSLSMNKVFYTKYFFS
SLFMAIFALTIPVFSNLFYDKLIPSASVSSLFGVAIIVAVFIVFEFILRTSKDIYQSITARQDDVDIDISFLEAVLYGKK
KNGKSMSSAFVLWNEFQKVKPILLNSVFQRIADIPIFLIFIAVIYVNLGWVVVVPIIVFIISIILSIVNHHYTNELMNKQ
KEGQKNRNVFISEVFLSIKMIHTLNNQGLLFDWVNTSNEQSYLNLKIRKLNLIYQSILGSMSSITQITIMIIAFFMVIKG
DITTGAIVSSVIVSGRISGITSNFSSTLISILSAEKTGKDLLSFFDEDQEEKTPALQSISKCEGEISIRGVSYQYDAQSS
VIINRLSIDIPSGQRVAIIGDCGAGKSSLLGLLSGYLSPTDGAILYDGYNLGHLSQNFFSQHLSVVTTHDVLFTGTVESN
FALKPQNDRGRVLKALHITNCGFILQHPMGLKFPVNFMAKNLSSGQQQQLLLARSLSSDASVFLWDEPTSNLDENTEKQI
FDNLDEFIQGNTLIMITHRRYLIKYFDRVLVMKGGKVIRDCTPEKLMG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4460 NP_458560.1 putative type-1 secretion protein Not tested SPI-4 Protein 0.0 93
SC4141 YP_219128.1 bacteriocin/lantibiotic ABC transporter Not tested SPI-4 Protein 0.0 93
STM4262 NP_463127.1 ABC-type bacteriocin/lantibiotic exporter Not tested SPI-4 Protein 0.0 93
siiF CAE11798.1 putative type-I secretion protein (putative inner membrane component) Virulence SPI-4 Protein 0.0 93
spi4_R AAC26655.1 ltkB homolog Virulence SPI-4 Protein 0.0 93

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SARI_03416 YP_001572387.1 hypothetical protein VFG0582 Protein 0.0 93