|
Name : SARI_03416 (SARI_03416) Accession : YP_001572387.1 Strain : Salmonella enterica RSK2980 Genome accession: NC_010067 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : V : Defense mechanisms COG ID : COG2274 EC number : - Position : 3321746 - 3323812 bp Length : 2067 bp Strand : - Note : 'KEGG: reh:H16_B0690 7.1e-51 rtxB2; ABC-type RTX toxin transporter, ATPase and permease components: Prot1E family; COG: COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain; Psort location: plasma membr DNA sequence : ATGGATACAAAGCTAGAACCATATTATTTAAGTGCAGAAAATGCATTGTCTATAGTTTCAAAAAAATTCAATATAAAAAT AGACATTAAAGAGGAAGATATAAATATTCGATTTAAAAAATATGATAGAAATAATACCGATGACTCAATACAAATGAAGA ATTTTTTCTTGTCATTAGGACTTTCTTTACAGGATATATTATTTAGTAGTGGCGAAGATCTATTAAATGAACCTATGCCC ATTTTACTACTGACCCCTGAAATGAAATGGATGGTATGTATCAGCGGTGGGCAAAAAATTAAATTAGTAAATGCCCGAGG GGAACTGTGTTATGTAGAGATACCTGATGAGTATCTAAAAAAACTATCTGCATTTAGTATACTTCCCTTAAATAAAGTTG TTGATAGTATAAGAGTGAATAATATTATTAAAAACTCTTTATCAATGAACAAGGTTTTTTATACAAAATACTTTTTTTCA TCTTTGTTTATGGCAATTTTTGCGCTGACAATTCCAGTTTTTAGTAATTTGTTTTATGACAAGCTTATTCCAAGTGCTTC TGTTTCGTCTTTATTTGGTGTCGCTATTATTGTAGCTGTATTTATCGTTTTTGAGTTTATTCTACGTACGTCAAAAGATA TTTACCAATCTATAACGGCCAGACAAGATGACGTCGATATTGATATCTCGTTTCTCGAGGCGGTGCTTTATGGTAAAAAG AAAAACGGTAAATCAATGTCATCAGCATTTGTTCTGTGGAATGAGTTTCAGAAGGTTAAACCTATTTTATTGAATTCTGT TTTTCAACGTATAGCCGATATCCCAATTTTTTTGATATTTATCGCTGTTATTTATGTGAATTTAGGATGGGTAGTGGTTG TTCCCATTATTGTTTTTATAATCTCTATTATTTTGTCCATTGTTAACCATCATTATACCAATGAGTTGATGAATAAACAA AAAGAAGGCCAAAAGAACAGAAATGTTTTCATATCGGAAGTGTTTTTATCAATTAAAATGATCCATACATTAAACAATCA GGGCTTACTATTTGATTGGGTTAATACATCAAACGAACAGTCATATCTTAATCTTAAGATAAGAAAGCTAAATCTTATCT ATCAATCAATATTAGGAAGTATGTCATCTATTACTCAAATAACAATAATGATAATAGCTTTTTTTATGGTAATTAAAGGT GATATTACCACTGGTGCAATTGTATCTTCAGTTATCGTTTCTGGACGTATCTCGGGGATCACCTCCAACTTTTCATCTAC ATTAATCTCTATATTGTCAGCAGAAAAAACGGGTAAGGACTTGCTTTCTTTCTTTGATGAAGATCAGGAAGAAAAGACAC CAGCGTTACAGTCAATTTCAAAGTGTGAGGGTGAGATTTCTATTCGTGGTGTTAGCTACCAATATGATGCGCAATCTTCA GTTATTATTAACCGTTTATCTATAGACATTCCTTCCGGACAACGAGTTGCAATTATAGGTGATTGTGGCGCAGGGAAAAG TTCATTATTGGGGCTGTTATCTGGCTACCTTTCACCTACAGATGGTGCCATTTTGTACGATGGGTATAATCTAGGGCACC TCTCCCAGAATTTTTTCTCACAACATTTAAGTGTCGTTACAACCCATGATGTTTTGTTTACTGGGACTGTTGAAAGTAAT TTTGCATTAAAACCACAAAATGACAGGGGACGGGTATTGAAAGCTCTTCATATAACGAATTGTGGTTTCATTTTACAGCA TCCTATGGGGTTAAAGTTTCCTGTAAACTTTATGGCTAAAAACCTTTCGTCTGGCCAGCAACAGCAATTATTATTAGCTC GTAGTTTAAGTAGTGATGCTAGTGTGTTTTTGTGGGATGAGCCAACATCAAATTTGGATGAGAACACAGAAAAACAAATT TTTGATAACCTGGATGAGTTTATTCAAGGGAACACACTCATTATGATTACTCACCGTCGTTATCTTATAAAATACTTTGA TAGAGTATTGGTGATGAAAGGGGGAAAAGTGATTCGGGATTGCACTCCTGAAAAATTAATGGGTTAA Protein sequence : MDTKLEPYYLSAENALSIVSKKFNIKIDIKEEDINIRFKKYDRNNTDDSIQMKNFFLSLGLSLQDILFSSGEDLLNEPMP ILLLTPEMKWMVCISGGQKIKLVNARGELCYVEIPDEYLKKLSAFSILPLNKVVDSIRVNNIIKNSLSMNKVFYTKYFFS SLFMAIFALTIPVFSNLFYDKLIPSASVSSLFGVAIIVAVFIVFEFILRTSKDIYQSITARQDDVDIDISFLEAVLYGKK KNGKSMSSAFVLWNEFQKVKPILLNSVFQRIADIPIFLIFIAVIYVNLGWVVVVPIIVFIISIILSIVNHHYTNELMNKQ KEGQKNRNVFISEVFLSIKMIHTLNNQGLLFDWVNTSNEQSYLNLKIRKLNLIYQSILGSMSSITQITIMIIAFFMVIKG DITTGAIVSSVIVSGRISGITSNFSSTLISILSAEKTGKDLLSFFDEDQEEKTPALQSISKCEGEISIRGVSYQYDAQSS VIINRLSIDIPSGQRVAIIGDCGAGKSSLLGLLSGYLSPTDGAILYDGYNLGHLSQNFFSQHLSVVTTHDVLFTGTVESN FALKPQNDRGRVLKALHITNCGFILQHPMGLKFPVNFMAKNLSSGQQQQLLLARSLSSDASVFLWDEPTSNLDENTEKQI FDNLDEFIQGNTLIMITHRRYLIKYFDRVLVMKGGKVIRDCTPEKLMG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4460 | NP_458560.1 | putative type-1 secretion protein | Not tested | SPI-4 | Protein | 0.0 | 93 |
| SC4141 | YP_219128.1 | bacteriocin/lantibiotic ABC transporter | Not tested | SPI-4 | Protein | 0.0 | 93 |
| STM4262 | NP_463127.1 | ABC-type bacteriocin/lantibiotic exporter | Not tested | SPI-4 | Protein | 0.0 | 93 |
| siiF | CAE11798.1 | putative type-I secretion protein (putative inner membrane component) | Virulence | SPI-4 | Protein | 0.0 | 93 |
| spi4_R | AAC26655.1 | ltkB homolog | Virulence | SPI-4 | Protein | 0.0 | 93 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SARI_03416 | YP_001572387.1 | hypothetical protein | VFG0582 | Protein | 0.0 | 93 |
