Gene Information

Name : SARI_03107 (SARI_03107)
Accession : YP_001572089.1
Strain : Salmonella enterica RSK2980
Genome accession: NC_010067
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3027761 - 3028273 bp
Length : 513 bp
Strand : +
Note : 'COG: COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains); Psort location: extracellular, including cell wall, score: 9'

DNA sequence :
ATGATAGTCGGCCTGCTTATCAGCACTCACGCCAGTGCCGTGCCGCCACTGTATGCGCAAATCGCCCGCCAGCAGCAGAT
TCCGGCAGAGCTGCTCTACGCGGTGGCCCGCGCGGAAAGCGGTACTCGACTGGCGCAGGGGTTACATCCGTGGCCGTGGA
CGCTGAATATTGCCGGAACCGGCTACCGTTACCCCAGCCGTTCTTCAGCCTGCCGGGCATTGCTGGCCTTCGCCCGTACC
CGCAGCCTGAAACGCATCGACGCAGGGCTGGGACAGATTAATCTCGGCTGGAACGGGCAATGGTTCCCCTCGCTGTGCGC
CAGTTTTGATCCGACGGACAATCTCACCGTCACCGCCCTGCTGCTGCGTCAGCACTACAATGCCTCCCCCGGAAGCTGGC
TGGACGCTGCCGCCCGCTACCACCACCCCGCCGGAGGCAAACCCGCCGCCATCTACCGCCACAAAATCAGCCAGCAAATC
CGGCTGCTCTCCGCATCAGGGACGTCGCCATGA

Protein sequence :
MIVGLLISTHASAVPPLYAQIARQQQIPAELLYAVARAESGTRLAQGLHPWPWTLNIAGTGYRYPSRSSACRALLAFART
RSLKRIDAGLGQINLGWNGQWFPSLCASFDPTDNLTVTALLLRQHYNASPGSWLDAAARYHHPAGGKPAAIYRHKISQQI
RLLSASGTSP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YE3494A YP_001007653.1 hypothetical protein Not tested YAPI Protein 6e-35 51
STY4559 NP_458645.1 hypothetical protein Not tested SPI-7 Protein 4e-33 51
t4257 NP_807855.1 hypothetical protein Not tested SPI-7 Protein 4e-33 51
PMI2591 YP_002152310.1 lytic transglycosylase Not tested Not named Protein 1e-31 50
api25 CAF28499.1 conserved hypothetical protein Not tested YAPI Protein 4e-35 50
YpsIP31758_3720 YP_001402674.1 transglycosylase Not tested YAPI Protein 5e-35 50
pph70 CAI36111.1 soluble lytic murein transglycosylase Not tested PPHGI-1 Protein 2e-31 47
EXA50 ABD94659.1 conserved hypothetical protein Not tested ExoU island A Protein 4e-30 47
unnamed ABR13378.1 hypothetical protein Not tested PAGI-5 Protein 3e-26 47
ORF SG70 AAN62292.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 1e-29 46
RL050 AAP84175.1 conserved hypothetical protein Not tested PAPI-1 Protein 2e-26 46
ORF C67 AAN62161.1 conserved hypothetical protein Not tested PAGI-2(C) Protein 6e-28 46