|
Name : SARI_03086 (SARI_03086) Accession : YP_001572068.1 Strain : Salmonella enterica RSK2980 Genome accession: NC_010067 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 3009741 - 3011096 bp Length : 1356 bp Strand : + Note : 'KEGG: plu:plu1031 2.4e-123 unnamed protein product; similar to DNA helicase K02314; COG: COG0305 Replicative DNA helicase; Psort location: nuclear, score: 23' DNA sequence : ATGAGTAAGCGCAAGCGGCCACAACCGCCCCACTCCGTCGAAGCGGAACAATCGGTGCTCGGCGGGCTGATGTTGGATAA CGATCGCTGGGATGACGTTACCACGCAGATTTCCGCGCAGGACTTCTTCATCTCCGCGCACCGGACGATTTATTCCCATA TGCAGACCCTGGTCGAACAGGGAAACCCCATCGATCTGATCACGCTGAGCGAATCGCTGGAACAGCAGGAGCAGCTCGAA CAGGTAGGCGGTTTCGCCTATCTGGCAGAGCTTTCCAAAAACACACCCAGTGCCGCCAATATCATTCCCTACGCGCAATA CATCGCCAGCTACGGTGAACTGCGCCAGCTTCTGTTATTAGGCAATGAACTGAGCGATATGGCAGGCCAGCCGCGCAGCA ATGTTGCCGACGTACTGAACTTTGCCGAACAAAAGCTGTTTGCTATTGCGCAGTCGCATCAGGATGGCGGCCTGACCGAC ATCAGCGCCTGCTTTGATAACGTGCTGGCAGGCATCGCCCAACGCTACGAGGCTGAACGCGGTAGCCTCAGCGGCACACC ATCCGGGCTGGAACAGCTCGACGCCCTGACCTGCGGCTTCCAGCCTGCCGACCTGATTATCGCCGCCGCTCGCCCCTCCG TCGGCAAAACAGCTTTCGCCCTGACGCTGTGCGTGAATGCGCTAATGCTGCGCCCTGCTCAACCGGTGCAAATCTACAGC ATGGAAATGTCGTCGGAGCAGCTACTGCTGCGTCTGGTTTCTCTGATTGGCCGCGTCTCGCAAACCCGGCTACGCAGTGG CGATCTCGGTGATGACGACTGGCAACAGATAGGTGTCAGCGCCAGTATCCTGATGAATGAATGGAAAGATCGTCTGCTGC TCGACGACTCCGGGATCCTCACGCCACCCTTGTTACGCAGTCGGGCCAGACGATCGCTGCGCCAGCATGGAATTCCCTCG CTGATCGTGGTCGATTACCTGCAACTGATGCGCAGCGGCGGCGCGGAGAACCGTAATCAGGAGATCTCAACGATCTCCCG CTCGCTGAAAGCGCTGGCGAAGGAACTAAATTGCCCAGTGCTGGCGCTGTCACAGCTTAACCGGGCGCTGGAGTCACGCC TTAACAAGCGCCCCTGCAATGCCGACCTGCGCGATTCCGGCTCTATCGAGCAGGATGCCGACGTCATCTTATTCCTCTAC CGCGACGAACTGTACGATCCCAACACGCTGGATCGGGGTATCGCTGAAGTCATTGTCAGCAAACAGCGCAACGGCCCGGT TGGCACGGTACGTACCCGCTTTATCAGCGATCAAACCCGCTTCGAATCGCTGTGCCAACAGGGAGTGGGGTCATGA Protein sequence : MSKRKRPQPPHSVEAEQSVLGGLMLDNDRWDDVTTQISAQDFFISAHRTIYSHMQTLVEQGNPIDLITLSESLEQQEQLE QVGGFAYLAELSKNTPSAANIIPYAQYIASYGELRQLLLLGNELSDMAGQPRSNVADVLNFAEQKLFAIAQSHQDGGLTD ISACFDNVLAGIAQRYEAERGSLSGTPSGLEQLDALTCGFQPADLIIAAARPSVGKTAFALTLCVNALMLRPAQPVQIYS MEMSSEQLLLRLVSLIGRVSQTRLRSGDLGDDDWQQIGVSASILMNEWKDRLLLDDSGILTPPLLRSRARRSLRQHGIPS LIVVDYLQLMRSGGAENRNQEISTISRSLKALAKELNCPVLALSQLNRALESRLNKRPCNADLRDSGSIEQDADVILFLY RDELYDPNTLDRGIAEVIVSKQRNGPVGTVRTRFISDQTRFESLCQQGVGS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 3e-103 | 55 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 1e-103 | 55 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 1e-102 | 54 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 1e-88 | 53 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 3e-95 | 52 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 6e-86 | 51 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 6e-86 | 51 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 1e-85 | 49 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 4e-73 | 44 |
