Gene Information

Name : SARI_02970 (SARI_02970)
Accession : YP_001571958.1
Strain : Salmonella enterica RSK2980
Genome accession: NC_010067
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 2901660 - 2902346 bp
Length : 687 bp
Strand : -
Note : 'COG: COG3121 P pilus assembly protein, chaperone PapD; Psort location: extracellular, including cell wall, score: 9'

DNA sequence : 
ATGAAAAAAACAACACCGATTTTTCTTCGATTATTGCTACTGCTGTCGGCGGCCGGCCTGTCGTTTGCCGCGCAGGCGGG
AGGCATTGCGTTGGGCGCCACCAGAGTAATTTATCCGCAGGGGAGTAAACAAACCTCCTTGCCGATTATTAATTCCTCTG
ACAGTAATGTTTTTTTAATTCAGTCATGGGTTGCGAATGCCGATGGTTCACGCTCGACAGATTTTATCGTTACGCCGCCT
CTCTTTGTGATACAACCCAAAAAAGAAAATATATTACGCATTATGTATGTCGGGCCGTCATTACCAACCGATCGCGAAAG
CGTATTTTATTTAAACAGTAAAGCCATACCCTCTGTCGATAAAAATAAACTGACCGGCAACACCCTGCAAATTGCGACTC
AAAGTGTGATTAAGCTATTTATTCGCCCGAAAAATTTGGCGGAGGCGCCAACTCATGCCCCGATGACGCTTTGTTGCCGT
AACGAGTATGGTCAGTTAACGATTGTTAATCCTTCGCCATACTACGTTTCGCTGGTTGAACTGCACAGCGCGGGGAAAAA
ACTGCCGAATACCATGGTGCCGCCGAAAGGAGCGATTACTCTACCGGCGACTCCCGGCCAGGTTTCTTTTCGGACGGTAA
ATGATTTTGGCGCAACGACGCCAGCCCGTGTTTGTTCAACTTCATGA

Protein sequence : 
MKKTTPIFLRLLLLLSAAGLSFAAQAGGIALGATRVIYPQGSKQTSLPIINSSDSNVFLIQSWVANADGSRSTDFIVTPP
LFVIQPKKENILRIMYVGPSLPTDRESVFYLNSKAIPSVDKNKLTGNTLQIATQSVIKLFIRPKNLAEAPTHAPMTLCCR
NEYGQLTIVNPSPYYVSLVELHSAGKKLPNTMVPPKGAITLPATPGQVSFRTVNDFGATTPARVCSTS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 5e-46 51
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 4e-43 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SARI_02970 YP_001571958.1 hypothetical protein VFG0875 Protein 3e-47 53
SARI_02970 YP_001571958.1 hypothetical protein VFG0445 Protein 1e-47 52
SARI_02970 YP_001571958.1 hypothetical protein VFG0911 Protein 2e-43 49
SARI_02970 YP_001571958.1 hypothetical protein VFG1644 Protein 2e-43 49
SARI_02970 YP_001571958.1 hypothetical protein VFG0455 Protein 1e-33 41