Gene Information

Name : SARI_02578 (SARI_02578)
Accession : YP_001571577.1
Strain : Salmonella enterica RSK2980
Genome accession: NC_010067
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 2504768 - 2505355 bp
Length : 588 bp
Strand : -
Note : 'COG: COG2801 Transposase and inactivated derivatives; Psort location: mitochondrial, score: 23'

DNA sequence :
ATGGCAACGCTGAGAGGCTTCCGTACAGGACGTTGGCTTGCCGGCAGGCTCATGAAAGAGCCGGGGCTGGTCAGTTGTCA
GCAACCTGCTCACCGGTATAAACGTGGTGGCCATGAACACATTGCTATCCCGAATCACCCTGAGCGGCAGTTCGCAGTGA
CAGAGCCAAATCAGGTGTGGTGCGGCAACGTGACGTATATCTGGACAGGTAAACGCTGGGCATACCTTGCTGTTGTTCTC
GACCTGTTCGCCAGGAAACCGGTGGGCCGGGCAATGTCGTTCTCACTGGACAGCAGACTGACCATCAAAGCGCTGGAAAT
GGCGTGGGAAACGCGTGGCAAACCAGCCGGGGTGATGTTCCACAGCGTCCAGGGCAGTCATTATACGAGCAGGCAGTTCC
GGCAGTTACTGTGGCGATACCGGATCAGGCAGAGCATGAGCCGGTGCGGAAACTGCCGGGATAATAGCCCAATGGAACGC
TTCTTCAGGAGTCTGAAGAACGAATGGATGCCGGTGGTGGGTTACGTAAGCTTCAGCGAGGCAGCTCACGCCATAACGGA
CTATATCGTTGGATATTACGCGCACTAA

Protein sequence :
MATLRGFRTGRWLAGRLMKEPGLVSCQQPAHRYKRGGHEHIAIPNHPERQFAVTEPNQVWCGNVTYIWTGKRWAYLAVVL
DLFARKPVGRAMSFSLDSRLTIKALEMAWETRGKPAGVMFHSVQGSHYTSRQFRQLLWRYRIRQSMSRCGNCRDNSPMER
FFRSLKNEWMPVVGYVSFSEAAHAITDYIVGYYAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 1e-79 87
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 1e-79 87
ECs4537 NP_312564.1 hypothetical protein Not tested LEE Protein 6e-51 60
unnamed AAC31485.1 L0006 Not tested LEE Protein 4e-51 60
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 3e-51 58
unnamed ACU09432.1 IS911 transposase orfB Not tested LEE Protein 8e-52 58
Z5089 NP_290241.1 transposase Not tested LEE Protein 1e-51 58
unnamed CAI43898.1 putative transposase Not tested LEE Protein 3e-51 58
ECO111_3779 YP_003236114.1 putative IS602 transposase OrfB Not tested LEE Protein 3e-51 58
l0006 CAD33765.1 L0006 protein Not tested PAI I 536 Protein 2e-37 57
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 2e-26 42
tnpB CAB61574.1 transposase B Not tested HPI Protein 2e-27 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SARI_02578 YP_001571577.1 hypothetical protein VFG1484 Protein 6e-80 87
SARI_02578 YP_001571577.1 hypothetical protein VFG0785 Protein 3e-52 58
SARI_02578 YP_001571577.1 hypothetical protein VFG1506 Protein 8e-38 57