Gene Information

Name : SARI_02426 (SARI_02426)
Accession : YP_001571430.1
Strain : Salmonella enterica RSK2980
Genome accession: NC_010067
Putative virulence/resistance : Resistance
Product : putative ABC transporter ATP-binding protein YbbA
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 2348765 - 2349451 bp
Length : 687 bp
Strand : -
Note : 'KEGG: pen:PSEEN1885 1.6e-60 ABC transporter, ATP-binding protein; COG: COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component; Psort location: cytoplasmic, score: 23'

DNA sequence : 
ATGCCAGCGGAAAATAGTGTTGAAGTTCATCGTCTCAGGAAGTCCGTCGGTCAGGGTGAGCATGAGCTTTCCATCCTTAC
TGGAGTTGAACTGGTTGTCAAACGCGGCGAAACCATTGCGCTGATTGGCGAATCAGGATCGGGGAAATCTACGCTGTTGG
CGATTCTCGCCGGACTGGACGACGGCAGTAGCGGGGAGGTCAGTCTGGTGGGGAAACCGCTTCACCAGATGGACGAAGAG
GCGCGGGCGCAGCTTCGCGCTCAGCATGTCGGCTTTGTTTTTCAATCCTTCATGCTGATTCCTACGCTCAACGCGTTGGA
AAACGTCGAACTGCCAGCCCTGCTGCGTGGTGAAAATAACGCTCAGAGCAAGGCGGGGGCGAAAGCGCTGCTCGAACAAC
TGGGGCTGGGAAAACGGCGCGATCACCTTCCGGCGCAGCTTTCCGGCGGCGAACAGCAGCGCGTAGCGCTGGCGCGCGCG
TTTAATGGGCGTCCTGATGTGCTGTTTGCCGATGAACCGACGGGTAATCTTGACCGTCAGACCGGAGATAAAATCGCCGA
CCTGCTATTTTCACTGAACCGCGAGCACGGCACCACTCTGATTCTGGTGACGCATGATCTGGCGCTGGCGGCGCGCTGCG
ATCGGCGGTTACGGCTGGTCAACGGTAAGTTACAGGAGGAGGCATGA

Protein sequence : 
MPAENSVEVHRLRKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGKPLHQMDEE
ARAQLRAQHVGFVFQSFMLIPTLNALENVELPALLRGENNAQSKAGAKALLEQLGLGKRRDHLPAQLSGGEQQRVALARA
FNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLALAARCDRRLRLVNGKLQEEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-31 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-31 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-31 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SARI_02426 YP_001571430.1 putative ABC transporter ATP-binding protein YbbA NC_008702.1.4606598. Protein 9e-31 48
SARI_02426 YP_001571430.1 putative ABC transporter ATP-binding protein YbbA NC_012469.1.7686878. Protein 4e-37 47
SARI_02426 YP_001571430.1 putative ABC transporter ATP-binding protein YbbA CP001581.1.gene798.p Protein 8e-36 43