|
Name : SARI_00233 (SARI_00233) Accession : YP_001569322.1 Strain : Salmonella enterica RSK2980 Genome accession: NC_010067 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0582 EC number : - Position : 215199 - 216470 bp Length : 1272 bp Strand : - Note : 'COG: COG0582 Integrase; Psort location: nuclear, score: 23' DNA sequence : ATGGGACCCACTAAGAAGGGTCCAAAAACCGAGGGTCCCAAAATGGCAAAAATCGCTAAGAAGCTCACTGACACTGAAAT CAAAAGCACCAAGCCAGCCGACAAAGAAATCAACTTGTTTGACGGTGATGGCTTGATCTTACGAATCGCTCCTTTGTCGA AAGGAGGCAAGAAAAATTGGTATTTCAGGTATGCAGTGCCAGTGAGTAAGAAAAGAACCAAAATGAGCCTTGGGACCTAC CCTCACCTCACACTGGCAAGAGCAAGGGCCTTGCGAGATGAGTACCTCTCCTTGCTTGCCAATGGCATTGATCCTCAAGT CCATAACAACGATAAGGCTAATGCCTTAAAGAATGCTACTGAACACACTCTCCAAACCGTGGCAAGGAAATGGTTGGATG AGAAGGTAAAGACCTCAGGTATCTCACAAGACCATGCAGAAGACATCTGGCGAAGCCTGGAGAGAAATATCTTTCCCGGA TTGGGTAATGTTCCTGTCAATGAGATCCGACCCAAACTCTTAAAGCAACATCTTGACCCTATTGAGCAACGAGGAGTCCT CGAAACTTTACGGCGAATAATTTCCCGATTAAATGAAATTTTCCGTTATGCAGCAACTGAGGAACTTATCGAATTTAATC CGGCTGACAACCTGGGGCAACGGTTCAGTAAGCCTAAAAAACAGAATATGCCAGCATTACCCCCTTCCGAACTCCCCCGC TTCCTGGTTGCTCTAAACAATGCTTCTATCCGTTTAGAAACAAGGCTACTGATTGAGTGGCAACTTCTCACATGGGTTCG CCCTGGTGAAGCTGTTTGCACAAGATGGACTGATATAGATACCGATAACTCAATGTGGAACATTCCTGCTGAATTTATGA AAATGAAGAAGCCCCATAAAGTCCCACTGAGCAAAGAAGCTTTGCGAGTATTGAATTCAATGAAAGCCATCAGTGGGCAC AGAGAGTGGGTTTTCCCCAGCATCAAAGCTCCACTCAATCACATGCATGAACAAACAGCAAATGCAGCCATAATCCGTAT GGGCTTTGGGGGTGAACTTGTCGCTCACGGTATGCGATCTATTGCTAGAACGGCTGCTGAAGAGAGCGGTAAATTCAGGA CAGAAGTGCTTGAAGCGGCTCTTGCACACTCAAAAAAGGATGAAATAATAGCAGCTTACAATCGAGCAGAATACTTAACA GAACGAGTTGCTCTTATGCAGTGGTGGAGTGATTACGTTCAAACTCAGAAAGTTAAAGCTATTGCTGCCTGA Protein sequence : MGPTKKGPKTEGPKMAKIAKKLTDTEIKSTKPADKEINLFDGDGLILRIAPLSKGGKKNWYFRYAVPVSKKRTKMSLGTY PHLTLARARALRDEYLSLLANGIDPQVHNNDKANALKNATEHTLQTVARKWLDEKVKTSGISQDHAEDIWRSLERNIFPG LGNVPVNEIRPKLLKQHLDPIEQRGVLETLRRIISRLNEIFRYAATEELIEFNPADNLGQRFSKPKKQNMPALPPSELPR FLVALNNASIRLETRLLIEWQLLTWVRPGEAVCTRWTDIDTDNSMWNIPAEFMKMKKPHKVPLSKEALRVLNSMKAISGH REWVFPSIKAPLNHMHEQTANAAIIRMGFGGELVAHGMRSIARTAAEESGKFRTEVLEAALAHSKKDEIIAAYNRAEYLT ERVALMQWWSDYVQTQKVKAIAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0847 | NP_230494.1 | phage family integrase | Not tested | VPI-1 | Protein | 4e-84 | 46 |
| VC0395_A0372 | YP_001216328.1 | phage family integrase | Not tested | VPI-1 | Protein | 4e-84 | 46 |
| int | AAK20773.1 | integrase | Not tested | VPI | Protein | 3e-84 | 46 |
| int | AAK20803.1 | integrase | Not tested | VPI | Protein | 3e-84 | 46 |
| unnamed | AAA82714.1 | integrase | Not tested | VPI | Protein | 3e-84 | 46 |
| VC0516 | NP_230167.1 | phage integrase | Not tested | VSP-2 | Protein | 9e-81 | 44 |
| VPI2_0001 | ACA01818.1 | phage family integrase | Not tested | VPI-2 | Protein | 4e-68 | 41 |
| VC1758 | NP_231394.1 | phage family integrase | Not tested | VPI-2 | Protein | 7e-68 | 41 |
| VC0395_A1357 | YP_001217300.1 | phage family integrase | Not tested | VPI-2 | Protein | 7e-68 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SARI_00233 | YP_001569322.1 | hypothetical protein | VFG1092 | Protein | 3e-68 | 41 |
