Gene Information

Name : SARI_02356 (SARI_02356)
Accession : YP_001571361.1
Strain : Salmonella enterica RSK2980
Genome accession: NC_010067
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : K : Transcription
COG ID : COG2207
EC number : -
Position : 2283379 - 2283807 bp
Length : 429 bp
Strand : -
Note : 'KEGG: bcz:BCZK3497 4.0e-09 adaA; transcriptional regulator, AraC family K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: cytoplasmic, score: 23'

DNA sequence : 
ATGTACGGTGTGGGAGCCGTTGACGAGTTTGATAGAGGGGAGAGCACGATGACTATTTCCGCTCAGGTTATCGACACGAT
TGTCGAGTGGATTGATGATAATTTGAATCAGCCGTTACGTATTGATGATATTGCCCGCCATGCGGGCTATTCCAAGTGGC
ACCTGCAACGCCTTTTTATGCAGTACAAAGGGGAGAGTCTGGGGCGCTATGTGCGTGAACGGAAGTTAAAACTGGCGGCG
CGCGATCTGCGTGACACCGATCAGAAAGTGTATGATATCTGTCTCAAGTATGGTTTTGATTCGCAGCAAACCTTTACGCG
CATTTTTACCCGCACATTCAACCTGCCGCCAGGCGCTTACCGTAAAGAAAAGCATGGCGCACGCATTGAAATGCTTAATC
GGCCAGCGCAAACCAGCGCCGCCAGATAA

Protein sequence : 
MYGVGAVDEFDRGESTMTISAQVIDTIVEWIDDNLNQPLRIDDIARHAGYSKWHLQRLFMQYKGESLGRYVRERKLKLAA
RDLRDTDQKVYDICLKYGFDSQQTFTRIFTRTFNLPPGAYRKEKHGARIEMLNRPAQTSAAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
soxS YP_219131.1 DNA-binding transcriptional regulator SoxS Not tested SPI-4 Protein 5e-19 49
tetD AAL08447.1 putative transcriptional regulator TetD Not tested SRL Protein 1e-17 47
tetD AEA34665.1 tetracycline resistance protein D Not tested Not named Protein 1e-17 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SARI_02356 YP_001571361.1 hypothetical protein CP001138.1.gene612.p Protein 3e-43 100
SARI_02356 YP_001571361.1 hypothetical protein CP001918.1.gene327.p Protein 1e-19 49
SARI_02356 YP_001571361.1 hypothetical protein CP000647.1.gene4499. Protein 2e-19 49
SARI_02356 YP_001571361.1 hypothetical protein CP001138.1.gene4488. Protein 2e-19 49
SARI_02356 YP_001571361.1 hypothetical protein NC_010558.1.6276025. Protein 5e-18 47
SARI_02356 YP_001571361.1 hypothetical protein BAC0371 Protein 2e-18 46
SARI_02356 YP_001571361.1 hypothetical protein NC_002695.1.914293.p Protein 2e-18 46
SARI_02356 YP_001571361.1 hypothetical protein CP000034.1.gene4505. Protein 4e-18 45
SARI_02356 YP_001571361.1 hypothetical protein CP001918.1.gene2033. Protein 7e-19 45
SARI_02356 YP_001571361.1 hypothetical protein CP001138.1.gene1637. Protein 4e-19 43
SARI_02356 YP_001571361.1 hypothetical protein BAC0560 Protein 6e-19 43
SARI_02356 YP_001571361.1 hypothetical protein NC_002695.1.917339.p Protein 6e-19 43
SARI_02356 YP_001571361.1 hypothetical protein CP000034.1.gene1596. Protein 6e-19 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SARI_02356 YP_001571361.1 hypothetical protein VFG0585 Protein 1e-19 49
SARI_02356 YP_001571361.1 hypothetical protein VFG1038 Protein 4e-18 47