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Name : SARI_02001 (SARI_02001) Accession : YP_001571023.1 Strain : Salmonella enterica RSK2980 Genome accession: NC_010067 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 1932289 - 1933581 bp Length : 1293 bp Strand : - Note : 'catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA' DNA sequence : ATGCTCGATCCCAATCTGCTGCGTAATGAGCCAGACGCAGTCGCTGAAAAACTGGCACGCCGGGGCTTTAAGCTGGATGT AGATAAGCTGCGCGCTCTTGAAGAGCGTCGTAAAGTTTTGCAGGTCAACACGGAAAACCTGCAGGCAGAGCGTAATTCTC GATCGAAATCCATCGGCCAGGCGAAAGCGCGCGGGGAAGATATCGAGCCTTTACGCCGGGAAGTGAATAAACTGGGCGAA GAGCTGGATGCGGCGAAAGCCGAGCTGGAGGCCTTGCTGGCGGAGATCCGCGATATCGCGCTAACCATTCCAAATCTGCC TGCGGATGAAGTGCCGGTAGGTAAAGATGAAAACGACAACGTTGAAGTCAGCCGCTGGGGTACTCCGCGTGAGTTTGATT TTGAAATCCGCGATCACGTCACCTTAGGTGAAATGCATTCTGGCCTCGACTTTGCCGCCGCGGTTAAGCTGACCGGCTCC CGTTTTGTGGTGATGAGAGGGCAGATTGCGCGTATGCATCGCGCATTGTCGCAGTTTATGCTGGATTTGCACACGGAACA GCACGGTTATAGTGAAAATTACGTACCGTATCTGGTTAACCACGACACGCTATACGGCACCGGCCAACTGCCGAAGTTTG CAGGCGATCTGTTCCACACCCGTCCGCTGGAAGAAGAAGCGGACAGCAGCAACTATGCATTGATCCCGACGGCGGAGGTA CCGCTGACCAACCTGGTGCGCGATGAAATCATCGACGAAGATCAACTACCGATTAAAATGACCGCGCATACGCCATGTTT CCGCTCTGAAGCGGGTTCTTATGGTCGTGATACCCGTGGTCTGATCCGTATGCATCAGTTCGATAAAGTGGAGATGGTGC AGATCGTTCGCCCGGAAGATTCCATGGCGGCGCTGGAAGAGATGACCGGCCATGCGGAAAAAGTGCTCCAGCTACTGGGA CTGCCGTACCGTAAAATCATCCTGTGTACCGGCGATATGGGCTTCGGCGCCTGCAAAACTTATGACCTTGAAGTCTGGGT TCCGGCGCAGAATACCTACCGCGAGATCTCCTCCTGTTCTAACATCTGGGACTTCCAGGCGCGCCGTATGCAGGCACGCT GTCGCAGCAAGTCCGACAAAAAGACCCGTCTGGTACATACCCTGAACGGTTCTGGTCTGGCGGTAGGCCGTACCCTGGTA GCCGTGATGGAAAACTATCAGCAGGCTGATGGTCGCATTGAGGTGCCGGAAGTATTACGTCCGTACATGAACGGGCTGGA ATATATCGGCTAA Protein sequence : MLDPNLLRNEPDAVAEKLARRGFKLDVDKLRALEERRKVLQVNTENLQAERNSRSKSIGQAKARGEDIEPLRREVNKLGE ELDAAKAELEALLAEIRDIALTIPNLPADEVPVGKDENDNVEVSRWGTPREFDFEIRDHVTLGEMHSGLDFAAAVKLTGS RFVVMRGQIARMHRALSQFMLDLHTEQHGYSENYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLEEEADSSNYALIPTAEV PLTNLVRDEIIDEDQLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPEDSMAALEEMTGHAEKVLQLLG LPYRKIILCTGDMGFGACKTYDLEVWVPAQNTYREISSCSNIWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLV AVMENYQQADGRIEVPEVLRPYMNGLEYIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-103 | 56 |
