Gene Information

Name : SARI_01974 (SARI_01974)
Accession : YP_001570997.1
Strain : Salmonella enterica RSK2980
Genome accession: NC_010067
Putative virulence/resistance : Virulence
Product : 3-deoxy-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1212
EC number : -
Position : 1902107 - 1902853 bp
Length : 747 bp
Strand : -
Note : CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS

DNA sequence :
ATGAGTTTCGTCGTTATCATTCCAGCCCGTTTTTCATCTACCCGACTGCCAGGCAAACCATTGCTGGATATCAACGGCAA
GCCCATGATTGTTCATGTCCTGGAGCGGGCGCGCGAATCTGGCGCGGAGCGCATTATTGTCGCGACCGATCATGAAGACG
TGGCCCGCGCAGTAGAAGCGGCTGGCGGTGAGGTGTGCATAACGCGCGCCGATCACCAGTCGGGTACCGAACGGTTAGCG
GAAGTGGTAGAGAAGTGCGGTTTTAGCGACGATACCGTTATTGTGAACGTCCAGGGCGATGAACCGATGATCCCGGCGGT
TATTATTCGCCAGGTCGCGGAAAACCTGGCGCAGCGGCAGGTCGGAATGGCGACGCTGGCGGCGCCGATTCACAGCGCCG
AAGAGGCGTTTAATCCTAATGCGGTGAAAGTTGTGCTGGATGCCGAAGGCTATGCGCTCTACTTCTCCCGGGCGACGATC
CCTTGGGATCGCGACCGCTTTGCAAAAAGTCTGGAAACGGTAGGGGATACTTGCCTTCGCCACCTGGGCATTTACGGCTA
TCGCGCAGGTTTTATCCGCCGTTACGTGAGCTGGCAACCCAGCCCGCTTGAACAGATTGAAATGCTGGAGCAACTCCGTG
TGCTGTGGTACGGCGAAAAAATTCATGTCGCCGTCGCTAAAGCAGTGCCCGGCACGGGCGTAGACACCGCCGACGACCTG
GAGCGCGTGCGCGCTGAAATGCGTTAA

Protein sequence :
MSFVVIIPARFSSTRLPGKPLLDINGKPMIVHVLERARESGAERIIVATDHEDVARAVEAAGGEVCITRADHQSGTERLA
EVVEKCGFSDDTVIVNVQGDEPMIPAVIIRQVAENLAQRQVGMATLAAPIHSAEEAFNPNAVKVVLDAEGYALYFSRATI
PWDRDRFAKSLETVGDTCLRHLGIYGYRAGFIRRYVSWQPSPLEQIEMLEQLRVLWYGEKIHVAVAKAVPGTGVDTADDL
ERVRAEMR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 3e-33 45
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 7e-33 45
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 3e-33 45