Gene Information

Name : SARI_01909 (SARI_01909)
Accession : YP_001570934.1
Strain : Salmonella enterica RSK2980
Genome accession: NC_010067
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG4690
EC number : -
Position : 1834012 - 1835481 bp
Length : 1470 bp
Strand : +
Note : 'KEGG: lsa:LSA0897 1.2e-73 pepD5; dipeptidase D-type (U34 family) K01274; COG: COG4690 Dipeptidase; Psort location: extracellular, including cell wall, score: 9'

DNA sequence :
ATGAAACTGTATTTTGCATTCGCCGTTACGCTGCTGGGTCTGGGTAAAGTCATCGCCTGCACTACCCTGTTGGTAGGCAA
TCAGGCTTCGGCTGACGGTTCCTTCATTATCGCGCGCAACGAAGATGGCTCGGCGAACAACGCCAAGCATATGGTTATCC
ATCCAATCTCGTTTCATCAACAAGGCGAGTATAAAGCACACCGGAACAACTTTAGCTGGCCGCTTCCAGAGACAGCGATG
CGCTATACGGCGATTCATGACTTTGACACTAACGATAACGCCATGGGGGAAGCAGGTTTCAATTCGGCGGGCGTCGGAAT
GAGCGCAACGGAAACCATTTATAACGGCAGCGCGGCACTGGCTGCCGATCCTTACGTAACAAAAACGGGAATCACGGAAG
ACGCCATTCAGACAGTGATCCTGCCAGTGGCGCATTCGGCACGTCAGGGCGCCAAATTACTGGGCGACATTATTGAACAA
AAAGGCGCGGGCGAAGGTTTCGGCGTCGCTTTTATTGATACTAAAGAGATATGGTATCTGGAGACGGGAAGTGGCCATCA
ATGGCTGGCGGTACGACTTCCAGCAGATAAATATTTCGTTTCCGCAAATCAGGGACGTTTACGCCGTTACGATCCAAATG
ATAAAGCGAATTATATGGCGTCGCCGACATTAGTCAGCTTTGCGAAAAAGCAGGGATTATATGATCCAGCCCACGGCGAA
TTCGACTTCCATCAAGCCTATTCGCAGGATAACAAAATCGATATCACCTATAATTATCCGCGCGTCTGGACGCTACAGCA
CCGGTTTAATCCACATCTGGATACTGCCGTTAGCAAAGGGGAAACGTTTCCCGTTTTTTTAACGCCAATGACGAAAATTA
ACCTGGAGGCAATAAAAAACGCGTTACGCAACCACTATCAGGGCACGCCGCACGATCCTTATGCCAATCATCACCCACAA
GAACCATGGCGACCCATATCCGTTTTTCGTACTCAGGAGTCGCATATCTTGCAGGTCAGACCGGGATTACCACAGGCCGT
AGGCGAAGTAGAATACGTGGCCTATGGAATGCCATCCCTTAGCGTGTATCTCCCCTATTATCAGGGAATGCGTCATTATC
AGCCCGGATATGATAAAGGAACCGATCGGGCGAGCAGTGATTCTACCTACTGGACATTTCGCACGCTGCAAACGCTGGTT
ATGCAGGACTACAATGCTTTTGCGCCAGATGTGCAACACGCCTGGAAAACATTTGAACAGCAAACGGCTAAGCAGCAACA
TACGATGGAACAGACATATCTGAGATTGTATGCGTCGCATCCGAAAGAAGCGCAACACTTACTGCAAAATTTTGAAGATA
AAACGATGCAAAATGCGCAAACGCTCGCTCATCGCCTGACAAATAATATTATTACGAAAATGACCTATAATACAGATATG
AAATATCACTTTTCAGGTACGCAACCATGA

Protein sequence :
MKLYFAFAVTLLGLGKVIACTTLLVGNQASADGSFIIARNEDGSANNAKHMVIHPISFHQQGEYKAHRNNFSWPLPETAM
RYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGSAALAADPYVTKTGITEDAIQTVILPVAHSARQGAKLLGDIIEQ
KGAGEGFGVAFIDTKEIWYLETGSGHQWLAVRLPADKYFVSANQGRLRRYDPNDKANYMASPTLVSFAKKQGLYDPAHGE
FDFHQAYSQDNKIDITYNYPRVWTLQHRFNPHLDTAVSKGETFPVFLTPMTKINLEAIKNALRNHYQGTPHDPYANHHPQ
EPWRPISVFRTQESHILQVRPGLPQAVGEVEYVAYGMPSLSVYLPYYQGMRHYQPGYDKGTDRASSDSTYWTFRTLQTLV
MQDYNAFAPDVQHAWKTFEQQTAKQQHTMEQTYLRLYASHPKEAQHLLQNFEDKTMQNAQTLAHRLTNNIITKMTYNTDM
KYHFSGTQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pipD NP_455591.1 putative secreted peptidase Virulence SPI-5 Protein 0.0 92
pipD NP_460067.1 pathogenicity island-encoded protein D Virulence SPI-5 Protein 0.0 92
pipD AAC33721.1 dipeptidase homolog Virulence SPI-5 Protein 6e-168 91

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SARI_01909 YP_001570934.1 hypothetical protein VFG0594 Protein 0.0 92