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Name : SARI_01797 (SARI_01797) Accession : YP_001570825.1 Strain : Salmonella enterica RSK2980 Genome accession: NC_010067 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 1727873 - 1730308 bp Length : 2436 bp Strand : + Note : 'KEGG: ddi:DDB0230105 0.0030 putative CLK family kinase K08287; COG: COG3188 P pilus assembly protein, porin PapC; Psort location: cytoplasmic, score: 23' DNA sequence : ATGCTCGGTATCGACGGACCAGGTAAAGATATTACCGATCTGTCTGCCTTTGAGGAAGGCGTAGGTCAAATGCCTGGCAC TTATCATGTTGATGTTGTCATCAACAATGCAGCACAGGGAACTTATGACATCCCCTTCTCAATGCAAAAAAACGCCCAAG GTCAGCAGAGCTTACAGCCCTGCCTGAGCATTGATATGCTCAAAAGCTTCAGGATTCGCACAGAACTGTTTCCCCAGCTC GTTGGCGACGGACAGTGCGCCGTGCTCAACGCGATCCCCATGGCTAGCGCCGAATTTGATTTCAACCATCAACGGCTGTT GCTGTCCATTCCACAGGCGGCAGTATCCACCATGGCCCGAGGCTGGGTCGCGCCGGATCGTCTGGATGAAGGGATCAATG CCCTGTTACTTAACTATACATTTACGGGTGGGAACACCAGCGCGCGCCAGTCAGGCAACAGCGATTCCGATAGCTATTTT CTCAACTTACGGCCAGGGCTGAACCTGGGACCATGGCGTCTGCGCAACTACAGCACCTGGAACCAGAACAAAACCGGTGA CACAAAAGAGGAAAGCTGGGATTCCGTCTATACCTATGCTCAACGCGATATTATCGCGCTAAAAAGCCAACTGACGCTGG GCGATAGCACTGCTCCTTCGGATATGTTTGACAGCGTGCCTTTTCGCGGCGTGCAGTTAGCTTCAGATGACGACATGCTG CCAGAAAGTTTACGTGGCTATGCTCCGATCATCCGTGGCATCGCCCGCACTAATGCTCAGGTGAGTGTGAAGCAAAATGG CTACGTTATTTATCAGACATACGTTTCACCCGGCGCTTTCGAGATCGCAGATATGTTTCCCACTGGCAGTAGCGGCGATC TGGATGTAACGATTAAGGAAACCGACGGCAGCGAGCAGCACCAGGTTATCCCCTTCGCCTCTCTGCCGGTTTTACAACGG GAAGGCCGTCTGAAATACAGCGTGACAAGCGGACAATACCGCCCCTACGATGGCGACATTGATAAAGAATGGTTTTCCCA GGCGACGGCGATCTACGGCCTGCCCGCAGGATTCACCCTCTATGGGGGTGGACAGTTCGCTCAACACTATCAATCTTTAC TGGCTGGTTTCGGTAAAAACCTCGGCGAACTGGGTGCCTTTTCAGTAGACGGTACTCAAGCCTGGTCAACCCAGCAAGAT ACGGATAAAGAAAGCGGACAATCCTGGCGCGTACGCTACAGCAAAAACATGCTGGCGACTGGGACGAATATTTCCATTTC CGGCTACCGTTACTCCACTTCGGGATATTACAGTCTGTCGGAGACGCTTGACACCTGGCGCGAAAACGAATGGAAAACCA GCAACGAGCGGCGACGTAACCGGGCGGAAATCATGCTCAACCAGAGTCTGGGGGACGTTGCGGGTTCACTGTCTGTCAAC GCCGTCAGCGAAGATTACTGGAACAGCGATCGCGAAATGCGTTCCATCGGCGTCGGTTACAGTAACAGTTTTTCAGGAAT TACCTGGAACCTCAACTACAGCTATAACCGCAACACGACTGCTGGTCGCGATAGCGATAAAGTCTACAGTGAAGATCAGG TCTTTACGCTGAATTTTAACATCCCTCTAGACTGCTGGCTTAGCAATAGCTGGGCAAGTTACAGCCTCAATACCAGCAAA CGCGGCGATACCAGTCACACTGTAGGTCTGAACGGCACCGCGCTGGAAAATCAAAATCTCAACTGGAGTATACAGGAAAG CCAGACCAATCACGGCCAGGGCAATGGCGGTTATGCCAACCTCGATTACCAGGGAACTTACGCGCGTGTGAATGCCGGTT ATGGTTACGACCACGATCAAAGAAATCTTAATTACAGTATCGACGGGGGCATCATTGCCCACGCCCATGGTTTGACATTC AGTCAGTCATTGGGGGAAACGGCGGCACTTGTCGAAGCGCCCGGCGTCAGCGGCGTCGAAGTCACTAATCAGACCGGGGT CAAAACTGACTTCCGCGGCTATACCGTCGTGCCTTATCTCTCGCCTTATCGGGAGAATACGGTTGGCCTCAACCCCGAGA CGCTGCCGGATGATGCCGATTTAACGCTGACTAATCAGATCCTTACTCCGACGCGCGGCGCCATCGTTCGCGCCCGTTTC GATACGCGTGTTGGTAAACGTGTGCTGATGACCTTGACACGCAGTAACGGCAAAACCGTCCCCTTCGGGGCAATCGTTTC TGTTCACGGGGAGAATCAGGCACAGAGTTTTATCGTTGGCGATGCAGGCCAGGTCTATCTTACCGGCATGCCGTTAAGCG GCTCACTGTTGGCGAAATGGGGAAATGCCGCTAGCGAAATATGTAAGGTGACGTTTCAGCTTCCAGAAGAGGATAACACT ATCGGTGTAATGCAAACCAATGCCCGCTGTAATTAA Protein sequence : MLGIDGPGKDITDLSAFEEGVGQMPGTYHVDVVINNAAQGTYDIPFSMQKNAQGQQSLQPCLSIDMLKSFRIRTELFPQL VGDGQCAVLNAIPMASAEFDFNHQRLLLSIPQAAVSTMARGWVAPDRLDEGINALLLNYTFTGGNTSARQSGNSDSDSYF LNLRPGLNLGPWRLRNYSTWNQNKTGDTKEESWDSVYTYAQRDIIALKSQLTLGDSTAPSDMFDSVPFRGVQLASDDDML PESLRGYAPIIRGIARTNAQVSVKQNGYVIYQTYVSPGAFEIADMFPTGSSGDLDVTIKETDGSEQHQVIPFASLPVLQR EGRLKYSVTSGQYRPYDGDIDKEWFSQATAIYGLPAGFTLYGGGQFAQHYQSLLAGFGKNLGELGAFSVDGTQAWSTQQD TDKESGQSWRVRYSKNMLATGTNISISGYRYSTSGYYSLSETLDTWRENEWKTSNERRRNRAEIMLNQSLGDVAGSLSVN AVSEDYWNSDREMRSIGVGYSNSFSGITWNLNYSYNRNTTAGRDSDKVYSEDQVFTLNFNIPLDCWLSNSWASYSLNTSK RGDTSHTVGLNGTALENQNLNWSIQESQTNHGQGNGGYANLDYQGTYARVNAGYGYDHDQRNLNYSIDGGIIAHAHGLTF SQSLGETAALVEAPGVSGVEVTNQTGVKTDFRGYTVVPYLSPYRENTVGLNPETLPDDADLTLTNQILTPTRGAIVRARF DTRVGKRVLMTLTRSNGKTVPFGAIVSVHGENQAQSFIVGDAGQVYLTGMPLSGSLLAKWGNAASEICKVTFQLPEEDNT IGVMQTNARCN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| safC | NP_454907.1 | outer-membrane fimbrial usher protein | Not tested | SPI-6 | Protein | 1e-135 | 42 |
| lpfC | YP_006098365.1 | fimbrial outer membrane usher protein | Not tested | Tn2411 | Protein | 1e-128 | 42 |
| lpfC | NP_839216.1 | long polar fimbriae | Not tested | SHI-2 | Protein | 5e-127 | 42 |
| lpfC | NP_709462.1 | long polar fimbriae | Not tested | SHI-2 | Protein | 5e-127 | 42 |
| sfaF | CAC16953.2 | SfaF protein | Virulence | PAI III 536 | Protein | 5e-142 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SARI_01797 | YP_001570825.1 | hypothetical protein | VFG0454 | Protein | 8e-162 | 46 |
| SARI_01797 | YP_001570825.1 | hypothetical protein | VFG0876 | Protein | 4e-144 | 43 |
| SARI_01797 | YP_001570825.1 | hypothetical protein | VFG0944 | Protein | 2e-139 | 41 |
| SARI_01797 | YP_001570825.1 | hypothetical protein | VFG1645 | Protein | 3e-142 | 41 |
| SARI_01797 | YP_001570825.1 | hypothetical protein | VFG0912 | Protein | 3e-142 | 41 |
