Gene Information

Name : SARI_01796 (SARI_01796)
Accession : YP_001570824.1
Strain : Salmonella enterica RSK2980
Genome accession: NC_010067
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 1727030 - 1727707 bp
Length : 678 bp
Strand : +
Note : 'COG: COG3121 P pilus assembly protein, chaperone PapD; Psort location: endoplasmic reticulum, score: 9'

DNA sequence : 
ATGAAATTCTATAGCCCACTCCTCGCATTCGTACCTTTATTCGCTATTGCTACTGTGGCAGAAGCGGGTGTTATTGTTGG
TGGAACACGTATTATCTACGACGGTAATAAGAAAGAAACCTCAATCAGCGTCAAAAACCCGGATAAATTTTCCTATCTTA
TTCAGTCATGGGCCGATATTAGCGAAGGCAGCAAAGAAAAAGCACCTTTTATCGTTACACCTCCCTTATTTCGCCTGGGC
GCCGGTCAGGAAAATATGCTGCGGATTATCCGCACCGGCGGCAACCTACCGGAAGATCGCGAATCTCTGTTCTGGATGAA
CATTAAATCTATTCCGGCTACGGAGAAGCAGGAAAGCGCCAATGTCTTGCAAATTGCGGTCAAAACCCGGATCAAAATCA
TTTACCGACCGCAAACATTGAAAAACGTCCCGGAAAACTTTGCTGATAAATTAACCTGGCAACGTATGGGTAATCAATTA
CGGGTAAACAATCCAACGCCCTATTACATGAATTTTAGCCTGGTAAACGTTGGTACGACCATGATACAGGACGCCACCTA
TGTTGCCCCAATGAGCAACTCGACTTTTACCATTCCAACTGGCGCGGCAGGAGACGTATCCTGGACTCTGATTAGTGATT
ATGGTGCAGCAGGCGCGAAACACTCCAGCCACCTGTAA

Protein sequence : 
MKFYSPLLAFVPLFAIATVAEAGVIVGGTRIIYDGNKKETSISVKNPDKFSYLIQSWADISEGSKEKAPFIVTPPLFRLG
AGQENMLRIIRTGGNLPEDRESLFWMNIKSIPATEKQESANVLQIAVKTRIKIIYRPQTLKNVPENFADKLTWQRMGNQL
RVNNPTPYYMNFSLVNVGTTMIQDATYVAPMSNSTFTIPTGAAGDVSWTLISDYGAAGAKHSSHL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 2e-39 44
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 1e-36 44
lpfB YP_006098366.1 fimbrial chaperone protein Not tested Tn2411 Protein 2e-37 41
afaB AAK16197.1 AfaB Virulence PAI-I AL862 Protein 2e-36 41
afaB ADD91742.1 putative AfaB-VIII periplasmic chaperone Not tested PAI-I AL862 Protein 2e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SARI_01796 YP_001570824.1 hypothetical protein VFG0911 Protein 6e-37 44
SARI_01796 YP_001570824.1 hypothetical protein VFG1644 Protein 7e-37 44
SARI_01796 YP_001570824.1 hypothetical protein VFG0445 Protein 3e-41 42
SARI_01796 YP_001570824.1 hypothetical protein VFG0875 Protein 1e-41 42