|
Name : SARI_01788 (SARI_01788) Accession : YP_001570816.1 Strain : Salmonella enterica RSK2980 Genome accession: NC_010067 Putative virulence/resistance : Unknown Product : PTS system glucose-specific transporter subunits IIBC Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1263 EC number : - Position : 1719945 - 1721426 bp Length : 1482 bp Strand : - Note : phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group t DNA sequence : ATGCGTGAAAACGTAGAAAAGCACAAATACTCAGGAGCACTCTCAATTATGTTTAAGAATGCATTTGCTAACCTGCAAAA GGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTCCCTATCGCAGGTATCCTGCTGGGTGTCGGTTCCGCTAACTTCA GTTGGCTGCCAGCCGTTGTATCGCACGTTATGGCGGAAGCGGGCGGATCTGTTTTTGCCAATATGCCGCTGATTTTCGCT ATCGGCGTGGCGTTGGGCTTCACTAACAACGACGGCGTTTCGGCGCTGGCTGCGGTGGTTGCGTATGGCATCATGGTGAA AACCATGGCTGTGGTTGCACCGCTGGTTCTGCATTTACCTGCTGAAGAGATTGCCGTAAAACACCTCGCTGACACGGGGG TGCTTGGCGGTATTATCTCCGGCGCGATCGCAGCGTATATGTTTAACCGCTTCTACCGCATCAAACTGCCTGAGTATCTG GGCTTCTTTGCAGGCAAGCGCTTCGTGCCGATCATTTCGGGTCTGGCCGCTATTTTCACCGGTGTGGTGCTGTCTTTCAT ATGGCCGCCGATCGGTACGGCTATCCAGGCATTCTCGCAGTGGGCGGCTTACCAGAACCCGGTTGTGGCGTTTGGTATTT ACGGTTTCATCGAGCGCTGCCTGGTGCCGTTTGGTCTGCACCATATCTGGAACGTTCCTTTCCAGATGCAGATCGGCGAA TACACCAACGCTGCGGGCCAGGTATTCCACGGCGACATTCCTCGCTATATGGCGGGCGACCCGACGGCGGGTATGCTCTC CGGCGGTTTCCTGTTCAAAATGTATGGCCTGCCGGCTGCGGCCATTGCCATCTGGCACTCTGCTAAACCGGAAAACCGTG CGAAAGTGGGCGGTATCATGATCTCCGCCGCGCTGACCTCGTTTTTGACTGGTATTACCGAGCCTATCGAGTTCTCCTTC ATGTTCGTGGCGCCGATCCTGTACATTATTCACGCGATTCTGGCAGGTCTGGCATTCCCGATCTGTATTCTGTTGGGGAT GCGTGACGGTACGTCGTTCTCCCACGGTCTGATCGACTTTATCGTGCTGTCCGGCAACAGCAGCAAACTGTGGCTGTTTC CGATTGTCGGCGCCGGTTATGCGATTGTGTACTACACCGTGTTCCGCGTGCTGATTAAAGCGCTGGATCTGAAAACGCCG GGTCGTGAAGACTCTACTGATGACGCAAAAGCGGGCGCAAGCAGCGAAATGGCGCCAGCTCTGGTGGCGGCTTTTGGCGG TAAAGAGAACATCACTAACCTGGATGCTTGTATCACGCGTTTGCGCGTGAGTGTGGCCGACGTAGCGAAAGTGGACCAGG CTGGCCTGAAGCAACTGGGCGCAGCGGGCGTTGTAGTCGCAGGTTCCGGCGTTCAGGCTATCTTCGGTACGAAATCCGAT AACCTGAAAACGGAAATGGATGAGTACATTCGTAACAGCTAA Protein sequence : MRENVEKHKYSGALSIMFKNAFANLQKVGKSLMLPVSVLPIAGILLGVGSANFSWLPAVVSHVMAEAGGSVFANMPLIFA IGVALGFTNNDGVSALAAVVAYGIMVKTMAVVAPLVLHLPAEEIAVKHLADTGVLGGIISGAIAAYMFNRFYRIKLPEYL GFFAGKRFVPIISGLAAIFTGVVLSFIWPPIGTAIQAFSQWAAYQNPVVAFGIYGFIERCLVPFGLHHIWNVPFQMQIGE YTNAAGQVFHGDIPRYMAGDPTAGMLSGGFLFKMYGLPAAAIAIWHSAKPENRAKVGGIMISAALTSFLTGITEPIEFSF MFVAPILYIIHAILAGLAFPICILLGMRDGTSFSHGLIDFIVLSGNSSKLWLFPIVGAGYAIVYYTVFRVLIKALDLKTP GREDSTDDAKAGASSEMAPALVAAFGGKENITNLDACITRLRVSVADVAKVDQAGLKQLGAAGVVVAGSGVQAIFGTKSD NLKTEMDEYIRNS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_2642 | YP_859416.1 | PTS system, glucose-specific IIBC component | Not tested | Not named | Protein | 8e-78 | 43 |
