Gene Information

Name : SARI_01588 (SARI_01588)
Accession : YP_001570624.1
Strain : Salmonella enterica RSK2980
Genome accession: NC_010067
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1536225 - 1536626 bp
Length : 402 bp
Strand : -
Note : 'COG: NOG20795 non supervised orthologous group; Psort location: cytoplasmic, score: 23'

DNA sequence : 
ATGTATGAGGAGGGATTCATGCTGGCAGTTTTAAAAGGTATTCCATTGATCCAGGATATCAAGGCGGAAGGTAATAGCCG
ATTCTGGATAATGACTATTGATGGACATCCTGCCAGAGGAGAGATTTTCTCAGACGCGTTTTCTATTTCTTTGTTCTTAA
ATAACCTGGAAAGTTTACCTACACCTTGTCTTGTCTATGTGACATTACTGCTTGCAGCACACCCGGACATCCATGATTAT
GCTATACAGCTCACAGCGGATGCAGGATGGTTAAACGGTTATTATACTACAAGTAATAGCGCTGAGCTTATTGCTATTGA
GATAGAAAAACACTTGTCTTTAACTTGTATTCTAAAAAATGTAATACGTAATCGTCATAAACTTTATTCGGGTGGGCTAT
AA

Protein sequence : 
MYEEGFMLAVLKGIPLIQDIKAEGNSRFWIMTIDGHPARGEIFSDAFSISLFLNNLESLPTPCLVYVTLLLAAHPDIHDY
AIQLTADAGWLNGYYTTSNSAELIAIEIEKHLSLTCILKNVIRNRHKLYSGGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
spiC AEZ06295.1 pathogenicity island 2 secreted effector protein Virulence SPI-2 Protein 6e-52 91
spiC AEZ06296.1 pathogenicity island 2 secreted effector protein Virulence SPI-2 Protein 6e-52 91
ssaB NP_460358.1 secreted effector protein Virulence SPI-2 Protein 4e-54 90
spiC AEZ06297.1 pathogenicity island 2 secreted effector protein Virulence SPI-2 Protein 2e-51 90
spiC AEZ06300.1 pathogenicity island 2 secreted effector protein Virulence SPI-2 Protein 2e-51 90
spiC AEZ06299.1 pathogenicity island 2 secreted effector protein Virulence SPI-2 Protein 8e-52 90
spiC NP_456135.1 putative pathogenicity island 2 secreted effector protein Virulence SPI-2 Protein 1e-51 90
spiC NP_805064.1 pathogenicity island secreted effector protein Virulence SPI-2 Protein 1e-51 90
spiC AAC44300.1 SpiC Virulence SPI-2 Protein 3e-54 90
spiC AEZ06298.1 pathogenicity island 2 secreted effector protein Virulence SPI-2 Protein 1e-51 89
ssaB YP_216401.1 secretion system apparatus protein SsaB Virulence SPI-2 Protein 6e-54 89

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SARI_01588 YP_001570624.1 hypothetical protein VFG0494 Protein 1e-54 90