Gene Information

Name : SARI_01581 (SARI_01581)
Accession : YP_001570617.1
Strain : Salmonella enterica RSK2980
Genome accession: NC_010067
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG5613
EC number : -
Position : 1530355 - 1531692 bp
Length : 1338 bp
Strand : -
Note : 'COG: COG5613 Uncharacterized conserved protein; Psort location: cytoplasmic, score: 23'

DNA sequence :
GTGGATTTTGCTTTTGGCAATGGTAACGCAATGTGTGCGGTAACGAGGAAAATTAGCCTTCAGGAGGCAAACAACGCGTT
GAAGAAACTACTTGATGCGGTCCCCGGAAATCATAAGAGTCCACCATTGCCTGACTTTTTGCGGATAAATCCCACGGTTT
TATCAATGATGATGACGATATTAATACTCAACGTCTTTGGTAGTAGCGCTCAATCGTTATGCCAACAGCTTGAGCGGGCA
ACTGAGGTACAAAATACATTACGTGATAAGCAGGTGAAGGAGTATCAGGAGCAGATCCAGAAGGCGATAGAGCAGGCTGA
TAAAGCGCGTAAAGCGGGCATTTTTGGCGCTATTTTTGACTGGATTACCGGCATATTTGAAACCGTGATTGGCGCCTTCA
AAGTTGTGGAAGGTTTTCTGTCAGATAATCCCGTAGAAATGGCTAGCGGCGTAGCCTATATGGCCGCAGGTTGTGCAGGA
ATGGTTAAAGCCGGAGCCGAAACCGCAATGTTATTCGGCGCTGACCCCGATACCTGTAAGGCGATTATTAATGTTACAAG
TAAGATTCAGCTTGGCTGTGAAATCGTCGCGCTGGCACTGGATGTTATCCAGATTGGTCGTGCTTTTATGGCGACGAGAG
CCTTGTCCGGCGCCGCTGAAAAAGTGCTTGACTCTGGTTTTGGAGAGGAATTAGCTGAGCGTATGGCAGGCGCAGGCGAA
GAAGAAATAGACGCGCTGGCTGAAGAGTTTGGCAGGCAGGTGAGCGAAAATTTTTCCAGACAATTCGAGTCTTTTGATCG
TGAAATGGTTGAGCTGGGAGAGATGGAAGAGGAATCTGCTGAGTTTTCTCGTACCGCCGAAAAAAATATGACGCGAAGGG
CGGGAAAAAGCTTTACGAAAGAGGGGGTGAAAGCCATGGTGAAAGAAGCGGCAAAAGAAGCCCTGGAAAAATGTGCGCAA
GAAGGGGAAAAATTTCTGTTAAAAAATATTCGTAAACAGATCCTTGTCAATGTGTTTAAAAAAATTATGTCTGCATTACT
GAGGGATTGTTCATGCAAAAGCTTACAGGCAATCAGATGTGCAACCGAAGGAGGCAATCAGACGAATGCTGGGGTGATTA
AAACAGAAAAAGCGAAGCTCGAAAAAAAAATAGAGCAATTAATAGCTCGGCAACAGTTTCAGGATTTCATAATGGAACAA
ATGGAAGGTCAAAAAAAGATGGAACAAAAACGTTTGCAGGCACTTTATAAAGGTAGCGGCGCAGCGCTTAAAGATACATT
AGATATCATTGATGATTATAGTAGCGTTCAGGCGAAAATTGCTGGCTGGCGCGCTTAA

Protein sequence :
MDFAFGNGNAMCAVTRKISLQEANNALKKLLDAVPGNHKSPPLPDFLRINPTVLSMMMTILILNVFGSSAQSLCQQLERA
TEVQNTLRDKQVKEYQEQIQKAIEQADKARKAGIFGAIFDWITGIFETVIGAFKVVEGFLSDNPVEMASGVAYMAAGCAG
MVKAGAETAMLFGADPDTCKAIINVTSKIQLGCEIVALALDVIQIGRAFMATRALSGAAEKVLDSGFGEELAERMAGAGE
EEIDALAEEFGRQVSENFSRQFESFDREMVELGEMEEESAEFSRTAEKNMTRRAGKSFTKEGVKAMVKEAAKEALEKCAQ
EGEKFLLKNIRKQILVNVFKKIMSALLRDCSCKSLQAIRCATEGGNQTNAGVIKTEKAKLEKKIEQLIARQQFQDFIMEQ
MEGQKKMEQKRLQALYKGSGAALKDTLDIIDDYSSVQAKIAGWRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sseC NP_456128.1 putative pathogenicity island effector protein Virulence SPI-2 Protein 8e-153 81
sseC NP_805071.1 pathogenicity island effector protein Virulence SPI-2 Protein 8e-153 81
sseC YP_216408.1 secretion system effector protein SseC Virulence SPI-2 Protein 7e-147 80
sseC CAA12187.1 SseC Virulence SPI-2 Protein 1e-148 79
sseC AAC28881.1 SseC Virulence SPI-2 Protein 1e-148 79
sseC NP_460365.1 translocation machinery component Virulence SPI-2 Protein 1e-148 79

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SARI_01581 YP_001570617.1 hypothetical protein VFG0501 Protein 6e-149 79