Gene Information

Name : SARI_01580 (SARI_01580)
Accession : YP_001570616.1
Strain : Salmonella enterica RSK2980
Genome accession: NC_010067
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1529752 - 1530255 bp
Length : 504 bp
Strand : -
Note : 'COG: NOG18516 non supervised orthologous group; Psort location: cytoplasmic, score: 23'

DNA sequence : 
GTGGATGCTGAATCATTGCTTTGGTTATTTGATAAAATCTGGGAGACGCTAATAGAGCTTGCCAAAAAGCTGCGCAATAT
CATGCGCGCCTATAACGTAGTAAAACAGCAGTTGAGTTGGGAACTACAGGTCAATGCCTTTAACACGCAACTGAAAACGA
TTGATCAAACGTATAAAGCCTCAATACTTAATGGGGTTGGCTCAATTTGTTCGGGAATGCTGACGATAGGATTCGGGGTT
ACAGGCGGGGAGGCCGGCGTTATGTTCGGTCAAGGCGCAGGGCACATCGCTGCGGGTGGCTTTAGCCTGGGGGGCAGTGC
TGCGCAACGTCAAAGCGATCAAACTAGTACGATTGCCGAACTGCAACAAAAGGGGGCCCAATCTTATAGCAAAACCTTGA
CGGAAATTATGGATAAAGCGGCTGATATTATGCAGCAAATCATGGGCATGGGGACATCACTGGTCGATGTTCTTGCTCAC
ATACTTCAGTCATTAACGAGGTAA

Protein sequence : 
MDAESLLWLFDKIWETLIELAKKLRNIMRAYNVVKQQLSWELQVNAFNTQLKTIDQTYKASILNGVGSICSGMLTIGFGV
TGGEAGVMFGQGAGHIAAGGFSLGGSAAQRQSDQTSTIAELQQKGAQSYSKTLTEIMDKAADIMQQIMGMGTSLVDVLAH
ILQSLTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sseD NP_460366.1 translocation machinery component Virulence SPI-2 Protein 8e-47 62
sseD NP_456127.1 putative pathogenicity island effector protein Virulence SPI-2 Protein 8e-47 62
sseD NP_805072.1 pathogenicity island effector protein Virulence SPI-2 Protein 8e-47 62
sseD YP_216409.1 secretion system effector protein SseD Virulence SPI-2 Protein 1e-47 62
sseD AAC28882.1 SseD Virulence SPI-2 Protein 5e-46 62
sseD CAA12188.1 SseD Virulence SPI-2 Protein 6e-47 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SARI_01580 YP_001570616.1 hypothetical protein VFG0502 Protein 2e-47 62