Gene Information

Name : SARI_01578 (SARI_01578)
Accession : YP_001570614.1
Strain : Salmonella enterica RSK2980
Genome accession: NC_010067
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG5010
EC number : -
Position : 1528848 - 1529276 bp
Length : 429 bp
Strand : -
Note : 'KEGG: ter:Tery_0416 8.9e-07 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099; COG: COG0457 FOG: TPR repeat; Psort location: cytoplasmic, score: 23'

DNA sequence : 
ATGAAAGAAAATCAGAAAAATAAAGTACCCGAAGAAATTCTGAAACAGCTCTTATCTGTTGATCCGGAGACCGTTTACGC
CAAGGGTTATGCCTCATGGCAGGAAGGTGATTATTCGCGCGCTTTAATCGATTTTAGCTGGTTGGTGATGGCCCAGCCAT
GGAGTTGGCGTGCCCATATTGCATTGGCTGGGACCTGGATGATGCTTAAAGAATACTCAACAGCCATCAATTTCTATGGA
CATGCATTGATGCTGGATGCCAGTCATCCAGAACCGGTTTATCAAACAGGCGTCTGTCTCAAAATGATGGGTGAACCAGG
GCTGGCGAGGGAGGCCTTTCAAACCGCCATCAAGATGAGTTATGCGGATGCCTCATGGAGCGAGATTCGCCAGAATGCGC
AAATAATGTTTGACACTCTTGTTACTTAA

Protein sequence : 
MKENQKNKVPEEILKQLLSVDPETVYAKGYASWQEGDYSRALIDFSWLVMAQPWSWRAHIALAGTWMMLKEYSTAINFYG
HALMLDASHPEPVYQTGVCLKMMGEPGLAREAFQTAIKMSYADASWSEIRQNAQIMFDTLVT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SC1424 YP_216411.1 secretion system chaperone protein SscB Virulence SPI-2 Protein 3e-60 94
sscB NP_460368.1 secretion system chaperone Virulence SPI-2 Protein 3e-60 94
sscB AAC28884.1 SscB Virulence SPI-2 Protein 2e-60 94
sscB CAA12190.1 SscB Virulence SPI-2 Protein 2e-60 94
sscB NP_456125.1 putative pathogenicity island protein Virulence SPI-2 Protein 1e-59 93
sscB NP_805074.1 pathogenicity island protein Virulence SPI-2 Protein 1e-59 93

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SARI_01578 YP_001570614.1 hypothetical protein VFG0504 Protein 9e-61 94