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Name : SARI_01568 (SARI_01568) Accession : YP_001570604.1 Strain : Salmonella enterica RSK2980 Genome accession: NC_010067 Putative virulence/resistance : Virulence Product : secretion system apparatus protein SsaV Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4789 EC number : - Position : 1521082 - 1523058 bp Length : 1977 bp Strand : - Note : with SsaC forms part of a protein export system across the inner and outer cell membranes; part of the Salmonella pathogenicity island 2; part of the type III secretion system DNA sequence : ATGGTTCTGGCGACGGTATTATTAATCGCTATTGTGATGATGCTGTTACCTTTACCGACCTGGATGGTCGATATCCTGAT TACTATCAACCTCATGTTTTCAGTGATCCTGCTCTTAATCGCAATTTATCTTAGCGACCCACTCGATTTATCTGTATTTC CGTCTTTATTACTGATTACTACGTTATATCGTTTGTCACTAACAATCAGCACGTCACGGCTGGTACTGTTGCAACACAAC GCCGGTAATATTGTAGACGCTTTCGGTAGGTTTGTCGTTGGGGGAAATCTTACCGTTGGGTTGGTCGTATTTACCATCAT TACAATCGTGCAATTTATTGTCATTACAAAAGGTATCGAGAGGGTGGCTGAGGTTAGCGCACGTTTCTCACTTGATGGCA TGCCAGGCAAACAAATGAGTATTGATGGAGATTTGCGCGCCGGAGTCATCGATGCAGACCATGCCCGTACATTAAGACAG CATGTCCAGCAGGAAAGCCGCTTCCTTGGTGCGATGGATGGCGCAATGAAATTTGTTAAAGGCGATACGATTGCCGGTAT TATTGTAGTACTGGTAAATATTATCGGTGGTATCATTATAGCTATCGTACAATATGATATGTCAATGAGTGAAGCTGTTC ACACTTACAGTGTACTTTCGATCGGAGACGGTTTATGTGGGCAAATTCCATCTCTGCTTATTTCTCTTAGCGCGGGAATT ATTGTTACCCGTGTTCCAGGTGAGAAACGCCAGAACCTGGCGACAGAGTTGAGTTCTCAGATTGCCAGACAACCTCAGTC ACTCATATTAACCGCTGTTGTTTTAATGCTCCTCGCTTTTATTCCTGGCTTCCCTTTTATCATTCTCGCTTTTTTTTCAG CTTTATTGGCGTTACCAATTATTCTCATTCGCCGCAAAAAGGCTGTGGTTTCCGTAAGTGGAGCAGAAGCGCAGGAAAAA GATAGTATGGTTCCCGGCGCGTGTCCTTTGATCTTACGTCTTACACCGACGTTACATTCTGCTGACCTGATACGTGATAT TGATGCCATGAGGTGGCTAGTATTTGAGGATACCGGAGTTCCTCTTCCTGAAGTTAATATTGAAGTTTTACCTGAACCCA CTGAAAAATTGACCGTACTGCTATATCAGGAACCCGTTTTTAGTTTATCTATCCCCACCCAGGCGGATTATTTATTAATA GGCGCGGATGCTAGTGTGGTGGGCGAAAGCCAGACATTACCGAACGGAATGGGGCAGATCTGTTGGCTTTCAAAAGACAT GGGCAATAAGGCGCAAGGTTTTGGGCTGGAAGTTTTTGCTGGCAGCCAACGTATCTCTGCCTTACTAAAATGTGCGCTGC TTCGGCATATGGGAGAGTTTATTGGTGTTCAGGAAACGCGTTATCTGATGAATGCAATGGAAAAAAACTACTCCGAACTG GTAAAAGAACTTCAGCGTCAGTTGCCCATCAACAAAATCGCTGAAACCTTGCAGCGGCTTGTATCAGAACGGGTCTCTAT TAGAGATTTACGCCTTATTTTCGGCACGTTAATTGACTGGGCGCCACGTGAAAAAGATGTCCTGATGTTGACAGAATACG TCCGTATCGCACTTCGCCGTCATATTCTGCGTCGTCTTAATCCTGAAGGAAAACCGTTACCGATTTTGCGGATCGGAGAA GGTATTGAGAATCTCGTTCGCGAATCTATTCGCCAGACGGCAATGGGCACCTATACTGCGCTATCGTCTCGCCATAAGTC TCAGATTCTGCAATTGATTGAGCAGGCGCTGAAGCGCTCTGCCAAATTATTCATTGTTACCTCTGTCGATACCCGGCGTT TCTTGCGAAAAATTACAGAAGCTACCTTATTCGACGTACCGATTTTGTCATGGCAGGAACTGGGAGAGGAATGCTTTGTA CAAGTGGTAGAAAGTATTGACCTTAGCGAAGAGGAACTGGCGGACAATGAAGAATGA Protein sequence : MVLATVLLIAIVMMLLPLPTWMVDILITINLMFSVILLLIAIYLSDPLDLSVFPSLLLITTLYRLSLTISTSRLVLLQHN AGNIVDAFGRFVVGGNLTVGLVVFTIITIVQFIVITKGIERVAEVSARFSLDGMPGKQMSIDGDLRAGVIDADHARTLRQ HVQQESRFLGAMDGAMKFVKGDTIAGIIVVLVNIIGGIIIAIVQYDMSMSEAVHTYSVLSIGDGLCGQIPSLLISLSAGI IVTRVPGEKRQNLATELSSQIARQPQSLILTAVVLMLLAFIPGFPFIILAFFSALLALPIILIRRKKAVVSVSGAEAQEK DSMVPGACPLILRLTPTLHSADLIRDIDAMRWLVFEDTGVPLPEVNIEVLPEPTEKLTVLLYQEPVFSLSIPTQADYLLI GADASVVGESQTLPNGMGQICWLSKDMGNKAQGFGLEVFAGSQRISALLKCALLRHMGEFIGVQETRYLMNAMEKNYSEL VKELQRQLPINKIAETLQRLVSERVSIRDLRLIFGTLIDWAPREKDVLMLTEYVRIALRRHILRRLNPEGKPLPILRIGE GIENLVRESIRQTAMGTYTALSSRHKSQILQLIEQALKRSAKLFIVTSVDTRRFLRKITEATLFDVPILSWQELGEECFV QVVESIDLSEEELADNEE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ssaV | CAA70536.1 | secretion system apparatus | Virulence | SPI-2 | Protein | 0.0 | 97 |
| ssaV | NP_456114.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 0.0 | 97 |
| ssaV | NP_805085.1 | secretion system apparatus protein SsaV | Virulence | SPI-2 | Protein | 0.0 | 97 |
| ssaV | NP_460379.1 | secretion system apparatus protein SsaV | Virulence | SPI-2 | Protein | 0.0 | 97 |
| ssaV | YP_216422.1 | secretion system apparatus protein SsaV | Virulence | SPI-2 | Protein | 0.0 | 97 |
| YPO0266 | YP_002345347.1 | secretion system apparatus protein SsaV | Virulence | Not named | Protein | 1e-131 | 58 |
| escV | YP_003236089.1 | putative translocator EscV | Virulence | LEE | Protein | 3e-105 | 48 |
| unnamed | AAL06368.1 | EscV | Virulence | LEE | Protein | 2e-104 | 48 |
| escV | YP_003223476.1 | translocator EscV | Virulence | LEE | Protein | 3e-106 | 48 |
| escV | CAC81861.1 | EscV protein | Virulence | LEE II | Protein | 5e-106 | 48 |
| escV | AAK26714.1 | EscV | Virulence | LEE | Protein | 4e-106 | 48 |
| escV | AAL57541.1 | EscV | Virulence | LEE | Protein | 4e-106 | 48 |
| escV | AAC31514.1 | L0035 | Virulence | LEE | Protein | 3e-106 | 48 |
| escV | ACU09459.1 | EscV protein | Virulence | LEE | Protein | 3e-106 | 48 |
| escV | YP_003232152.1 | T3SS structure protein EscV | Virulence | LEE | Protein | 6e-106 | 48 |
| escV | CAI43875.1 | EscV protein | Virulence | LEE | Protein | 2e-106 | 48 |
| escV | NP_290269.1 | hypothetical protein | Virulence | LEE | Protein | 5e-106 | 48 |
| escV | AAC38382.1 | EscV | Virulence | LEE | Protein | 1e-106 | 48 |
| ECs4569 | NP_312596.1 | hypothetical protein | Virulence | LEE | Protein | 5e-106 | 48 |
| escV | AFO66414.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 2e-98 | 48 |
| escV | AFO66296.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 4e-98 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SARI_01568 | YP_001570604.1 | secretion system apparatus protein SsaV | VFG0514 | Protein | 0.0 | 97 |
| SARI_01568 | YP_001570604.1 | secretion system apparatus protein SsaV | VFG0729 | Protein | 8e-107 | 48 |
| SARI_01568 | YP_001570604.1 | secretion system apparatus protein SsaV | VFG0813 | Protein | 2e-106 | 48 |
| SARI_01568 | YP_001570604.1 | secretion system apparatus protein SsaV | VFG0064 | Protein | 9e-82 | 43 |
