Gene Information

Name : SARI_01566 (SARI_01566)
Accession : YP_001570602.1
Strain : Salmonella enterica RSK2980
Genome accession: NC_010067
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1519411 - 1519794 bp
Length : 384 bp
Strand : -
Note : 'COG: NOG23008 non supervised orthologous group; Psort location: nuclear, score: 23'

DNA sequence : 
GTGATTCTGGAAACCTTGCTGGAGATAATAGCGCGACGTGAAAAGCAATTACGAGGCAAACTTGCCGTACTTGATCAGCA
GCAACAGGCGCTTATTTCTGAACAGCAGGTTTGCCAGACGCGCGCTTTAGCAGTGAATGCCAGGTTGAAAGAATTAACGG
ACTGGCAAGGAACGTTATCTTGTCATTTACTGTTGGATAAGAAACTACAAATGGCCAGGCTATTCACCCAGGCACAGAGT
TTTTTGACGCAGCGCCAGCAGTTAGATAATCAATATCAGCAGCTTGTCTCCCAGCAAAGTAAATTACAGGAGAATGTCAA
TGCTCTTATGAAAAGAAAAGAAAAAATTACTATGGTATTAAACGATGCGTATTACCAAAGTTGA

Protein sequence : 
MILETLLEIIARREKQLRGKLAVLDQQQQALISEQQVCQTRALAVNARLKELTDWQGTLSCHLLLDKKLQMARLFTQAQS
FLTQRQQLDNQYQQLVSQQSKLQENVNALMKRKEKITMVLNDAYYQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaO NP_460381.1 type III secretion system apparatus protein Virulence SPI-2 Protein 3e-34 85
ssaO CAA70538.1 secretion system apparatus Virulence SPI-2 Protein 2e-34 85
ssaO YP_216424.1 secretion system apparatus protein SsaO Virulence SPI-2 Protein 4e-35 85
ssaO NP_456112.1 putative type III secretion protein Virulence SPI-2 Protein 7e-34 84
ssaO NP_805087.1 type III secretion protein Virulence SPI-2 Protein 7e-34 84
ssaO AAX49618.1 SsaO Virulence SPI-2 Protein 2e-29 84

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SARI_01566 YP_001570602.1 hypothetical protein VFG0516 Protein 8e-35 85