Gene Information

Name : SARI_01561 (SARI_01561)
Accession : YP_001570597.1
Strain : Salmonella enterica RSK2980
Genome accession: NC_010067
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4791
EC number : -
Position : 1516354 - 1517133 bp
Length : 780 bp
Strand : -
Note : 'COG: COG4791 Type III secretory pathway, component EscT; Psort location: plasma membrane, score: 23'

DNA sequence : 
ATGACGCAGCAGCTAAATGAATGGATTATTGTATTAGCTGTGGCTTTTATTAGACCATTAGGCCTTTCTTTATTACTTCC
TCTGCTAAAAAGTGGCAGTCTTGGGACCGAGCTTTTACGTAATGGTGTTCTTATATCGCTTACCTTTCCCGTATTGCCGA
TCATTTATCAGCAACATATTTTTATGCATGTTGGTAAAGATTACAGTTGGTTGGGTTTAATCACAGGAGAGATAATTATT
GGCTTTTTGATTGGATTTTGTGCGGCGGTACCCTTTTGGGCAGTTGATATGGCAGGATTTTTGTTAGATACTTTACGAGG
GGCTACAATGGGTGCAATATTCAATTCTACAATGGAGGCTGAAACCTCACTCTTTGGCTTGCTTTTCAGCCAGTTCCTGT
GTATGATTTTTTTTATAAGTGGCGGTATGGAATTTATATTAAACATTCTATATGAATCCTACCAATATTTACCACCGGGT
CGTACTTTATTATTCGACCGTCAATTTCTTAAATATATCCAGGTAGAGTGGAGAACACTTTATCAATTATGTATCAGTTT
CTCTCTTCCTGCCATAATATGTATGGTATTAGCTGATCTGGCGTTAGGTCTTTTAAATCGCTCGGCGCAACAACTGAATG
TGTTTTTCTTCTCAATGCCACTCAAAAGTATACTTGTTTTATTAATGCTCTTGATATCATTCCCTTATGCCCTTCATCAT
TATTTGGTTGAAAGCGATAAATTTTATATTTATCTAAAAAACTGGTTTCCATCTGTATGA

Protein sequence : 
MTQQLNEWIIVLAVAFIRPLGLSLLLPLLKSGSLGTELLRNGVLISLTFPVLPIIYQQHIFMHVGKDYSWLGLITGEIII
GFLIGFCAAVPFWAVDMAGFLLDTLRGATMGAIFNSTMEAETSLFGLLFSQFLCMIFFISGGMEFILNILYESYQYLPPG
RTLLFDRQFLKYIQVEWRTLYQLCISFSLPAIICMVLADLALGLLNRSAQQLNVFFFSMPLKSILVLLMLLISFPYALHH
YLVESDKFYIYLKNWFPSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaT NP_456107.1 putative type III secretion protein Virulence SPI-2 Protein 2e-97 94
ssaT NP_805092.1 type III secretion protein Virulence SPI-2 Protein 2e-97 94
ssaT NP_460386.1 type III secretion system apparatus protein Virulence SPI-2 Protein 1e-95 92
ssaT YP_216429.1 secretion system apparatus protein SsaT Virulence SPI-2 Protein 7e-96 92
ssaT CAA68201.1 secretion system apparatus, SsaT Virulence SPI-2 Protein 7e-96 92
YPO0272 YP_002345354.1 type III secretion apparatus protein Virulence Not named Protein 3e-46 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SARI_01561 YP_001570597.1 hypothetical protein VFG0521 Protein 4e-96 92