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Name : SARI_01560 (SARI_01560) Accession : YP_001570596.1 Strain : Salmonella enterica RSK2980 Genome accession: NC_010067 Putative virulence/resistance : Virulence Product : secretion system apparatus protein SsaU Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4792 EC number : - Position : 1515302 - 1516357 bp Length : 1056 bp Strand : - Note : 'member of a type III secretion system which is part of a pathogenicity island in Salmonella, Yersinia and pathogenic Escherichia coli' DNA sequence : ATGAGCGAAAAAACAGAACAACCTACAGAAAAGAAATTACGTGACGGCCGTAAGGAGGGGCAGGTTGTCAAAAGTATTGA GATAACATCATTATTTCAGCTTATTGCACTTTTTTTATATTTTCATTTCCTTACTGAAAAGGTTATATTGAGAATTATCG AGTTAATAAATTTTACATTACAATTAATAAATAAACCATTTTCTTATGCATTAACGCAGTTGAGTTATTCTTTAGTAGAT TCATTAAGTTCAGTAATACTATTTCTGGGGGCAGGGATAATAATTTCTACTGTTGCTAGTGTGTTTCTTCAGGTGGGAGT AGTTATTGCCAGCAAAGCCATTGGTTTTAAAAGCGATCACATAAATCCGGTAAGCAACTTTAAGCAGATATTCTCTTTAC ATAGCGTAGTGGAATTATGTAAATCCACATTGAAAGTTATCATATTATCTCTTATCTTAGCATTTTTCTTTTATTATTAT GTCAGTACTTTTCGGGCGCTACCGTACTGTGGATTAGCTTGTGCCTTACCTGTGGTTTTTTGTTTAATAAAATGGTTATG GGTAGGGGTGATGGCCTTTTATATAGTTGTTGGCATACTTGATTATTCTTTTCAATATTATAAAATTAGAAAAGATCTAA AAATGAGCAAAGATGACGTAAAACAGGAGCATAAAGATCTTGAGGGCGATCCTCAAATGAAGACACGTCGTCGGGAAATG CAGAGTGAAATACAAAGTGGTAGTTTAGCTCAATCTGTTAAACAATCTGTTGCGGTAGTGCGTAATCCAACGCATATTGC GGTTTGTCTTGGCTATCATCCCACCGATATGCCAATACCACGGGTTCTGGAGAAAGGTAGTGATGCTCAAGCTAACTATA TTGTTAATATAGCTGAACGTAACTGCATTCCTGTTGTTGAAAATGTTGATCTGGCCCGCTCATTATTTTTTGAAGTAGAA CGTGGAGATAAAATTCCTGAAACTTTATTTGAACCCGTTGCAGCATTGTTACGTATGGTGATGAAGATAGATTATGCGCA TTCTACTGAAACATAA Protein sequence : MSEKTEQPTEKKLRDGRKEGQVVKSIEITSLFQLIALFLYFHFLTEKVILRIIELINFTLQLINKPFSYALTQLSYSLVD SLSSVILFLGAGIIISTVASVFLQVGVVIASKAIGFKSDHINPVSNFKQIFSLHSVVELCKSTLKVIILSLILAFFFYYY VSTFRALPYCGLACALPVVFCLIKWLWVGVMAFYIVVGILDYSFQYYKIRKDLKMSKDDVKQEHKDLEGDPQMKTRRREM QSEIQSGSLAQSVKQSVAVVRNPTHIAVCLGYHPTDMPIPRVLEKGSDAQANYIVNIAERNCIPVVENVDLARSLFFEVE RGDKIPETLFEPVAALLRMVMKIDYAHSTET |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ssaU | YP_216430.1 | secretion system apparatus protein SsaU | Virulence | SPI-2 | Protein | 2e-147 | 92 |
| ssaU | NP_460387.1 | secretion system apparatus protein SsaU | Virulence | SPI-2 | Protein | 1e-147 | 92 |
| ssaU | CAA68202.1 | secretion system apparatus, SsaU | Virulence | SPI-2 | Protein | 8e-148 | 92 |
| ssaU | NP_456106.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 6e-148 | 92 |
| ssaU | NP_805093.1 | secretion system apparatus protein SsaU | Virulence | SPI-2 | Protein | 6e-148 | 92 |
| YPO0273 | YP_002345355.1 | secretion system apparatus protein SsaU | Virulence | Not named | Protein | 8e-75 | 48 |
| escU | AAC38372.1 | EscU | Virulence | LEE | Protein | 8e-51 | 41 |
| escU | NP_290280.1 | secretion system apparatus protein SsaU | Virulence | LEE | Protein | 1e-50 | 41 |
| ECs4580 | NP_312607.1 | secretion system apparatus protein SsaU | Virulence | LEE | Protein | 1e-50 | 41 |
| escU | YP_003236100.1 | T3SS structure protein EscU | Virulence | LEE | Protein | 1e-50 | 41 |
| escU | AAC31525.1 | L0046 | Virulence | LEE | Protein | 8e-51 | 41 |
| escU | ACU09470.1 | secretion system apparatus protein SsaU | Virulence | LEE | Protein | 8e-51 | 41 |
| escU | AFO66307.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 9e-50 | 41 |
| escU | AFO66403.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 9e-50 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SARI_01560 | YP_001570596.1 | secretion system apparatus protein SsaU | VFG0522 | Protein | 4e-148 | 92 |
| SARI_01560 | YP_001570596.1 | secretion system apparatus protein SsaU | VFG0718 | Protein | 4e-51 | 41 |
| SARI_01560 | YP_001570596.1 | secretion system apparatus protein SsaU | VFG0824 | Protein | 5e-51 | 41 |
