Gene Information

Name : SARI_00110 (SARI_00110)
Accession : YP_001569205.1
Strain : Salmonella enterica RSK2980
Genome accession: NC_010067
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 105519 - 106340 bp
Length : 822 bp
Strand : -
Note : 'KEGG: rru:Rru_A2894 2.6e-85 ABC transporter component K02074; COG: COG1121 ABC-type Mn/Zn transport systems, ATPase component; Psort location: cytoplasmic, score: 23'

DNA sequence : 
ATGAGTCAATCTGCGATTACCGTTGATCAAGTCACGGTGACGTATCGCAACGGCCATACCGCCCTACGGGATGCCACTTT
TCAGGTGCCTGGCGGTACAATCGCCGCTCTGGTAGGCGTAAATGGTTCCGGTAAATCTACGTTATTTAAAGCGTTAATGG
GCTTTGTGCATCTTGCGCAGGGCGATATCACTATCCTGCAACAGTCGGTCAATACAGCGCTGAAAAAAAACCTCATTGCT
TATGTTCCGCAATCGGAAGAAGTGGACTGGTCATTTCCGGTACTGGTGGAAGATGTGGTGATGATGGGACGCTACGGCCA
TATGGGCTGGCTGCGCCGTCCCACAGCGCATGACCACGCCTGTGTTGATGCCGCGCTGGCGCGGGTGGATATGCAGGAGT
ATCGCCACCGGCAGATTGGCGAGCTGTCCGGCGGACAGAAAAAACGTGTGTTTCTCGCCAGGGCCATCGCTCAGGATGGC
CAGGTGATCCTGCTGGATGAACCTTTTACCGGCGTAGATGTAAAAACCGAAGCACGAATCATCGATCTGCTACGGGAACT
GCGCGATGAAGGTCGTACCATGCTGGTATCAACGCATAATCTCGGCTCCGTCACCGAGTTTTGCGACTATACGGTCATGA
TTAAAGGGACCGTGCTGGCCAGCGGTCCGACAGAAACTACTTTTACCGCTGCTAATCTGGAACAGGCGTTTAGCGGCGTT
CTACGCCATATCGCGCTAAGCGGCGGCGAAGAGCACATCATCACCGATGACGAGCGCCCCTTTATTTCCCGGCGTGTAGC
CAGTGGAGGAAAATCGTCATGA

Protein sequence : 
MSQSAITVDQVTVTYRNGHTALRDATFQVPGGTIAALVGVNGSGKSTLFKALMGFVHLAQGDITILQQSVNTALKKNLIA
YVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRPTAHDHACVDAALARVDMQEYRHRQIGELSGGQKKRVFLARAIAQDG
QVILLDEPFTGVDVKTEARIIDLLRELRDEGRTMLVSTHNLGSVTEFCDYTVMIKGTVLASGPTETTFTAANLEQAFSGV
LRHIALSGGEEHIITDDERPFISRRVASGGKSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 2e-127 99
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 1e-127 99
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 4e-126 99
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 4e-126 99
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-127 99

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SARI_00110 YP_001569205.1 hypothetical protein BAC0350 Protein 9e-128 99
SARI_00110 YP_001569205.1 hypothetical protein BAC0440 Protein 6e-80 64
SARI_00110 YP_001569205.1 hypothetical protein BAC0400 Protein 1e-48 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SARI_00110 YP_001569205.1 hypothetical protein VFG0526 Protein 8e-128 99