Gene Information

Name : SARI_00109 (SARI_00109)
Accession : YP_001569204.1
Strain : Salmonella enterica RSK2980
Genome accession: NC_010067
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 104662 - 105522 bp
Length : 861 bp
Strand : -
Note : 'COG: COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components; Psort location: plasma membrane, score: 23'

DNA sequence :
ATGAACTGGCTTGTCGAGCCGTTTGGCTATCAGTATATGCTCAACGCGATGTGGGTCTCCGCGATGGTGGGCGGCCTGTG
CGCGTTTCTCTCCTGCTATTTGATGCTCAAAGGCTGGTCGCTAATTGGGGATGCGCTATCTCACTCTATTGTGCCTGGCG
TCGCGGGCGCCTGGATGTTGGGGCTGCCCTTCTCGCTCGGCGCATTTCTTTCCGGCGGGCTGGCGGCAGGGAGTATGCTT
TTTCTTAACCAACGCTCACGCCTGAAAGAAGACGCGATTATCGGGCTTATCTTCTCCTCTTTTTTTGGCGTCGGCCTTTT
TATGGTTTCGCTCAATCCAATGTCGGTGAATATCCAGACGATTATTCTCGGCAACGTGCTGGCGATCGCGCCAGCGGATA
TTGTGCAACTGGCGATTATCGGCGTGGTCTCGCTGACAATTCTGCTGTTAAAGTGGAAAGATTTGATGGTCGTCTTTTTC
GATGAAACCCATGCGCGTTCCATCGGCCTTAATCCAGGCCTTCTAAAGCTGTTGTTTTTCACCCTATTGTCCGTCTCCAC
CGTGGCCGCTTTACAAACCGTCGGGGCGTTCCTGGTAATCTGTCTTGTCGTCACTCCGGGCGCAACGGCCTGGTTACTAA
CCGACCGTTTTCCACGTCTGCTCGTGATTGCCGTAATGATTGGCAGCCTGACCAGTTTTTTAGGCGCCTGGCTAAGCTAC
TGGCTGGATGGCGCCACTGGCGGGATTATTGTCGTCATGCAAACCTTACTGTTCATCACGGCCTTTATTTTCGCCCCGAA
GCACGGTCTGTTAGCCAACCGTCGGCGCGCCCGCCTGCATAAGGAGCCGTCATGTTCTTAA

Protein sequence :
MNWLVEPFGYQYMLNAMWVSAMVGGLCAFLSCYLMLKGWSLIGDALSHSIVPGVAGAWMLGLPFSLGAFLSGGLAAGSML
FLNQRSRLKEDAIIGLIFSSFFGVGLFMVSLNPMSVNIQTIILGNVLAIAPADIVQLAIIGVVSLTILLLKWKDLMVVFF
DETHARSIGLNPGLLKLLFFTLLSVSTVAALQTVGAFLVICLVVTPGATAWLLTDRFPRLLVIAVMIGSLTSFLGAWLSY
WLDGATGGIIVVMQTLLFITAFIFAPKHGLLANRRRARLHKEPSCS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 6e-105 98
sitC NP_461784.1 permease Virulence SPI-1 Protein 6e-105 98
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 6e-105 98
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 6e-105 98
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 4e-105 98
sitD NP_461785.1 permease Virulence SPI-1 Protein 8e-38 42
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 6e-38 42
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 2e-37 42
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 2e-37 42
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-37 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SARI_00109 YP_001569204.1 hypothetical protein BAC0351 Protein 3e-105 98
SARI_00109 YP_001569204.1 hypothetical protein BAC0441 Protein 1e-67 66
SARI_00109 YP_001569204.1 hypothetical protein BAC0352 Protein 4e-38 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SARI_00109 YP_001569204.1 hypothetical protein VFG0527 Protein 3e-105 98
SARI_00109 YP_001569204.1 hypothetical protein VFG0528 Protein 3e-38 42