Gene Information

Name : SARI_00106 (SARI_00106)
Accession : YP_001569201.1
Strain : Salmonella enterica RSK2980
Genome accession: NC_010067
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : K : Transcription
COG ID : COG2207
EC number : -
Position : 101533 - 102405 bp
Length : 873 bp
Strand : +
Note : 'COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: cytoplasmic, score: 23'

DNA sequence : 
ATGAATAAATCAGTTGGGGCTATTAGCAATAATTACCTTCAACAGTCGAGCAAAGCTTCATTAATAAATGGATTAGCTGA
TGTAAGAGGCTATTATGTCGCAAACTGCCTATTAATCAAACTTAATAAAGGCAGTTTGCGAATTGAAAATGAGTTTGGAG
AGTTCATCGAGCAATCTGCACCGTGTTTATTTTTATTGGAAAAAGATCAAACGATTACATTTAGCATGAGCGAAATTGAA
GGTCATATTGATTTTTCTTCACTGGAAGTTTCCTATGACTTAATGCAAAAATTCTACAAAGTCTTTTACAGCACAATAAA
TTATAATGATAGAGAGTTATCATTAAAAACAAAGCCAAAGCACTTTTTCCATGCCGAGTTGTTACCCGGGATGAGTGATA
CTTTTGACTCTATTTTGAATGGTGTGACGTGTCCACGAGTTTGTAGTAATGTGAGTATTGATGACCATGATTATTCATAT
TACTCATTGATGTATCTTATATCGGCATTTGTACGTAAACCCGGTGGGTTTGATTTCCTTGAGCGAGCGATAAAAATTAC
GACAAAAGAGAAAGTTTATAACATTATTATTAGTGATATCACCCGAAAATGGTCACAGGCTGAGGTGGCGGGAAAGCTGT
TTATGAGCGTATCAAGTCTGAAGCGTAAACTGGCTGCTGAAGATGTGAGTTTTAGCAAAATTTACCTGGATGCGCGTATG
AATCAGGCTATCAAGTTGTTACGTATGGGCGCTGGAAATATTTCACAAGTTGCGACGATGTGTGGCTATGATACGCCTTC
CTATTTTATCGCTATTTTTAAACGCCATTTTAAAATTACACCACTTAGCTTTATGCGTACAATTAATCATTAA

Protein sequence : 
MNKSVGAISNNYLQQSSKASLINGLADVRGYYVANCLLIKLNKGSLRIENEFGEFIEQSAPCLFLLEKDQTITFSMSEIE
GHIDFSSLEVSYDLMQKFYKVFYSTINYNDRELSLKTKPKHFFHAELLPGMSDTFDSILNGVTCPRVCSNVSIDDHDYSY
YSLMYLISAFVRKPGGFDFLERAIKITTKEKVYNIIISDITRKWSQAEVAGKLFMSVSSLKRKLAAEDVSFSKIYLDARM
NQAIKLLRMGAGNISQVATMCGYDTPSYFIAIFKRHFKITPLSFMRTINH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hilC NP_461788.1 invasion regulatory protein Virulence SPI-1 Protein 7e-127 94
hilC YP_217786.1 AraC family transcriptional regulator Not tested SPI-1 Protein 2e-127 94
sprA AAD37784.1 transcriptional regulator SprA Virulence SPI-1 Protein 5e-127 94
sprA NP_457261.1 possible AraC-family transcriptional regulator Virulence SPI-1 Protein 3e-126 94
sprA NP_806470.1 AraC family transcriptional regulator Virulence SPI-1 Protein 3e-126 94

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SARI_00106 YP_001569201.1 hypothetical protein VFG0531 Protein 3e-127 94