Gene Information

Name : SARI_00102 (SARI_00102)
Accession : YP_001569197.1
Strain : Salmonella enterica RSK2980
Genome accession: NC_010067
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4669
EC number : -
Position : 98740 - 99498 bp
Length : 759 bp
Strand : +
Note : 'COG: COG4669 Type III secretory pathway, lipoprotein EscJ; Psort location: golgi, score: 9'

DNA sequence :
ATGATTCGTCGATATCTATATACCTTTCTGCTGGTAATGACCCTTGCCGGCTGTAAGGATAAGGATCTTTTAAAAGGACT
GGACCAGGAACAGGCTAATGAAGTCATTGCCGTCCTGCAAATGCACAATATAGAGGCGAATAAAATTGATAGCGGAAAAT
TGGGCTATAGTATTACCGTTGCTGAGCCTGATTTTACCGCTGCGGTGTACTGGATTAAAACCTATCAGCTTCCTCCCCGG
CCACGGGTGGAAATCGCACAGATGTTCCCAGCGGATTCGCTGGTATCATCTCCGCGAGCTGAAAAGGCCCGGTTATATTC
GGCTATTGAACAGCGACTGGAGCAATCATTACAGACGATGGAGGGCGTGCTTTCCGCCAGGGTCCATATTAGCTATGATA
TTGATGCTGGTGAAAATGGACGTCCGCCAAAACCTGTTCATCTGTCGGCGTTAGCCGTATATGAACGAGGTTCGCCGCTT
GCGCATCAGATCAGCGATATCAAGCGATTCTTAAAGAATAGTTTTGCCGATGTGGATTATGACAATATTTCTGTTGTGTT
GTCAGAACGTTCAGATGCCCAATTACAGGCACCCGGCACGCCAGTAAAACGTGATTCTTTTGCAACCAGTTGGATTGTGC
TGATTATTTTGTTATCCGCGATGTTAGCAGGATTTGGCATCTGGTATTACAAAAACCATTATGCCCGGAATAAGAAAGGT
ATAACGGCTGATGATAAGGCAAAATCGTCAAATGAATAG

Protein sequence :
MIRRYLYTFLLVMTLAGCKDKDLLKGLDQEQANEVIAVLQMHNIEANKIDSGKLGYSITVAEPDFTAAVYWIKTYQLPPR
PRVEIAQMFPADSLVSSPRAEKARLYSAIEQRLEQSLQTMEGVLSARVHISYDIDAGENGRPPKPVHLSALAVYERGSPL
AHQISDIKRFLKNSFADVDYDNISVVLSERSDAQLQAPGTPVKRDSFATSWIVLIILLSAMLAGFGIWYYKNHYARNKKG
ITADDKAKSSNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
prgK NP_457265.1 pathogenicity 1 island effector protein Virulence SPI-1 Protein 8e-114 99
prgK NP_806474.1 pathogenicity island 1 effector protein Virulence SPI-1 Protein 8e-114 99
prgK YP_217790.1 cell invasion protein Virulence SPI-1 Protein 7e-115 99
prgK NP_461792.1 needle complex inner membrane lipoprotein Virulence SPI-1 Protein 7e-115 99
prgK AAS66872.1 PrgK Virulence SSR-2 Protein 6e-58 58
ECs3716 NP_311743.1 EprK Not tested LIM Protein 1e-54 56
eprK AAZ31284.1 EprK Virulence ETT2 Protein 2e-53 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SARI_00102 YP_001569197.1 hypothetical protein VFG0533 Protein 3e-115 99
SARI_00102 YP_001569197.1 hypothetical protein VFG0998 Protein 3e-45 47
SARI_00102 YP_001569197.1 hypothetical protein VFG1787 Protein 3e-37 46