Gene Information

Name : cadR (USA300HOU_pUSA300HOUMR0007)
Accession : YP_001569053.1
Strain :
Genome accession: NC_010063
Putative virulence/resistance : Resistance
Product : cadmium binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4300
EC number : -
Position : 4500 - 5117 bp
Length : 618 bp
Strand : +
Note : -

DNA sequence : 
ATGATTCAAACGGTTGTTGCTGCTGCTGTTCTTTATATTGCTACAGCAGTTGATTTATTAGTAATTTTATTAATATTTTT
TGCTAGAGCAAAGACTAGAAAAGAATATAGAGATATTTATGTTGGTCAATATTTAGGGTCTATTATTTTAATATTAGTTA
GTTTGTTTTTAGCTTTTGTATTAAATTATGTTCCAGAAAAGTGGATATTAGGTTTATTGGGTTTAATACCAATTTATCTT
GGAATTAAAGTGGCTATTTATGATGATTGTGAAGGAGAAAAGAGAGCTAAAAAAGAATTGAATGAAAAAGGATTGTCTAA
ATTAGTTGGTACGGTTGCAATTGTTACGATAGCAAGTTGTGGCGCCGATAATATTGGTTTATTTGTTCCGTATTTTGTGA
CATTAAGTGTTACTAATTTATTACTTACTCTGTTTGTCTTTTTAATTTTAATTTTCTTCTTGGTGTTTACTGCACAAAAA
TTAGCTAATATTCCAGGAATTGGAGAAATTGTTGAGAAATTTAGTCGTTGGATTATGGCTATTATTTATATAGCTTTAGG
TTTATTTATTATTATTGAAAATGACACTATTCAAACAATTTTAGGATTTATATTTTAA

Protein sequence : 
MIQTVVAAAVLYIATAVDLLVILLIFFARAKTRKEYRDIYVGQYLGSIILILVSLFLAFVLNYVPEKWILGLLGLIPIYL
GIKVAIYDDCEGEKRAKKELNEKGLSKLVGTVAIVTIASCGADNIGLFVPYFVTLSVTNLLLTLFVFLILIFFLVFTAQK
LANIPGIGEIVEKFSRWIMAIIYIALGLFIIIENDTIQTILGFIF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SERP2221 YP_189776.1 cadmium resistance family protein Not tested vSe1 Protein 2e-56 94
cadD YP_252014.1 cadmium binding protein CadD Not tested SCCmec Protein 1e-57 92
cadD YP_254238.1 cadmium binding protein CadD Not tested ¥ðSh1 Protein 6e-55 87

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cadR YP_001569053.1 cadmium binding protein BAC0057 Protein 7e-60 100