Gene Information

Name : Pmob_0363 (Pmob_0363)
Accession : YP_001567428.1
Strain : Petrotoga mobilis SJ95
Genome accession: NC_010003
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 389153 - 391645 bp
Length : 2493 bp
Strand : +
Note : PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: tpt:Tpet_0726 ATPase AAA-2 domain protein

DNA sequence :
ATGTTTGATAATTTTACTGAAAGAGCTGCGAAAGTTTTTATTGAGGCTCAAAATGAAGCAAAACAGATGGGACATCCCTA
TGTGGGGACAGAACACATTTTATTAGGATTGTTGAAAGTTGGAGGAGGCCATTTAGATACCGTATTTGAAGAATTTAATT
TGTACTATAATTCTATAAAGATGGAAATAACAAATGTTGTTGGTACGAATTCAACACAGGGAATAATAGGTTCTCCACAA
CCAACTCCTAGAGCAAAAAGAATATTAGAGTTGGCATATGATGAATCTGAGCTTATGGGTTTCAATAAGATAGATGCGGA
ACATCTTCTTTTAGGCATTTGTAGGGAAGCCGAAGGGATAGCCTCTCATATATTGAAACGTTCAGGAATAAATCTAACTT
TGATGAGAAAAGAATTAACGGATATGATGATTAAGGGTAGATCAACCGGGAGGATGGAGATTGCTAAAACTGAAGAGTTA
GAAGAAAGAAAGCGTCAAAAACAGAATGCGCTAAAACAGCTCGAAGAATACGGAACTGATTTAACTGCTCAAGCTGAGAA
CCGCAAACTGGATCCTATAATTGGAAGAGAAATAGAAATTAATCGCATAATGGAAATATTGGCGAGACGAAAAAAGAACA
ATCCTGTTTTGATTGGTGAGGCAGGTGTAGGTAAAAGTGCAGTGGTCGAGGGTCTGGCACAAAGAATTGTTGAAGGCCGA
GTACCTGAAATATTAAAAAATAAAACTATTTTTTCCTTAGATATTACCTCAATAGTAGCGGGAACAAAATATCGTGGAGA
ATTTGAGAAACGAATGAAAAAATTGATGCAGATATTACAAAAGACTGAAGATATTATTCTTTTTATCGACGAATTGCATA
TGATTGTAGAGGCTGGTGCGGCTGAAGGTTCTTCCATGGACGCAGCAAATGTTTTAAAACCGGCTTTAGCAAACGGAGAA
ATAACCGTAATAGGGTCCACCACAGCGAATGAGTACAGGAAATTCATCGAAAAAGATCCAGCCCTCGAAAGACGTTTCCA
AAAGATATATGTAACTGAACCAACTATCGAAGAAACTATAAATATATTATCTGGAATCAAATTCAAATACGAGGAACATC
ACAAAGTCAAATATAACCATGGTGCAATTCAATCAGCTGTTCAACTCTCGGTAAGGTATATTACAGATAGACACCTACCA
GATAAAGCGATAGATGTTATCGATGAAGCTGGAGCTAAAGCCCGTTTAAGTGCTCTAACGCTCCCTGATAAATTAAAAAT
TCAATATGAAAAGATTGCAGATATCGAAAGTAAAAGAAACGATCCCAATTCTAAAGAAAACGTTGAAGAAAAACTAAAAA
AGATGAAAGAAAAGTATGAAGAAGAATATTCAAAATGGAGATCTGAAGCAGAAAATAAAATAATTCAAATAACCGAAGAG
GATATAGCTGAAATAATATCTAATTGGACTGGTGTTCCGCTCAGACAGTTGCGTGCAGAAGAGATGGAAAAATTATTGAA
TTTAGAGGCTGTCTTACACGAACGAGTGGTAGGGCAGGATGAAGCAATAAAATCAGTTGCAAAAGCTATAAGAAGAGCGC
GAAGTGGATTAAAAGACCCTAGAAGACCAACAGGTGTATTTATGTTTTTAGGCCCGACCGGTGTTGGGAAAACTGAACTA
GCTAAGACTCTAGCAACTTATCTTTTTGGAAACGAAACGCATTTAGTAAGAATAGATATGAGTGAATACATGGAAAAATT
CAGTGTCTCCAGACTTGTGGGTGCTCCCCCGGGGTATGTCGGCTACGATGAAGGTGGGCAATTAACAGAAATAGTAAGAA
GAAGACCTTATTCCGTAATTTTGCTGGACGAAATAGAAAAAGCTCATACAGACGTATACAATATTTTGTTGCAAATAATG
GATGAAGGAAGATTGACTGATTCTCAAGGGAGAACGGTTGACTTTAGAAACACAATAATTATTATGACCTCTAACCTCGG
TTCTGAACAGATTAGCAAAACTAAAAGAAGCTTAGGTTTTGTAGAAGAAGGTACAATAGAAAGCGAATACAAAGATATCA
AAGAACAGGTGATGTCTGCGGTAAAGGCGGCATTCAAACCTGAATTCATAAACAGATTAGATGATGTCATTGTATTTCAC
CCGCTCACTAAAAATCAACTTAAAAATATTATATCTATTCAACTTAGCGACCTAAAAAGCCGATTGGAAGAAAGGAATCT
TACATTATCCGTGAAAGAAAGTGCCATTGATTTCTTACTGGAAAAGGGTTATGATTCTGTCTTTGGAGCTAGGCCATTGA
AAAGAGCTATACAAAGATATATTGAAGATCCTTTGTCCGAAGAATTATTAAAAGGAAAATACGAAGAAGGAGATAAGATA
TTAGTTACTCACCAAAAATCTAAAGAAAGTCTTTCTTTTAGAAGAGTTCCTAAGGATAAGAAGCAAATGGAAAAGAAAGT
GGTCAATAGTTGA

Protein sequence :
MFDNFTERAAKVFIEAQNEAKQMGHPYVGTEHILLGLLKVGGGHLDTVFEEFNLYYNSIKMEITNVVGTNSTQGIIGSPQ
PTPRAKRILELAYDESELMGFNKIDAEHLLLGICREAEGIASHILKRSGINLTLMRKELTDMMIKGRSTGRMEIAKTEEL
EERKRQKQNALKQLEEYGTDLTAQAENRKLDPIIGREIEINRIMEILARRKKNNPVLIGEAGVGKSAVVEGLAQRIVEGR
VPEILKNKTIFSLDITSIVAGTKYRGEFEKRMKKLMQILQKTEDIILFIDELHMIVEAGAAEGSSMDAANVLKPALANGE
ITVIGSTTANEYRKFIEKDPALERRFQKIYVTEPTIEETINILSGIKFKYEEHHKVKYNHGAIQSAVQLSVRYITDRHLP
DKAIDVIDEAGAKARLSALTLPDKLKIQYEKIADIESKRNDPNSKENVEEKLKKMKEKYEEEYSKWRSEAENKIIQITEE
DIAEIISNWTGVPLRQLRAEEMEKLLNLEAVLHERVVGQDEAIKSVAKAIRRARSGLKDPRRPTGVFMFLGPTGVGKTEL
AKTLATYLFGNETHLVRIDMSEYMEKFSVSRLVGAPPGYVGYDEGGQLTEIVRRRPYSVILLDEIEKAHTDVYNILLQIM
DEGRLTDSQGRTVDFRNTIIIMTSNLGSEQISKTKRSLGFVEEGTIESEYKDIKEQVMSAVKAAFKPEFINRLDDVIVFH
PLTKNQLKNIISIQLSDLKSRLEERNLTLSVKESAIDFLLEKGYDSVFGARPLKRAIQRYIEDPLSEELLKGKYEEGDKI
LVTHQKSKESLSFRRVPKDKKQMEKKVVNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pmob_0363 YP_001567428.1 ATPase VFG0080 Protein 3e-149 53
Pmob_0363 YP_001567428.1 ATPase VFG0079 Protein 0.0 50