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Name : Pmob_1801 (Pmob_1801) Accession : YP_001568813.1 Strain : Petrotoga mobilis SJ95 Genome accession: NC_010003 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 1977940 - 1979799 bp Length : 1860 bp Strand : - Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; CoA-binding domain protein; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domai DNA sequence : ATGAAACATTTGTCTAAAAGATCTTTTAGATTGATGATAATTGACTATATTTTGTTTTTCCTTGCTTACATTGTTGCAAT GTTCATAAGGTTTCAATTTGACTTTGTGGAGATGAGAAAGTACATCTCCCCCATCTTTTTCTTTCCTTTGATTATGGTAA TTGTTTTTTATTACTCTGGAATATATAGATATATTTGGAGATTTGCCACTCTTAACGAATTAAGACCTGTATTTAATAGT GGTTTCATAGGTTTCCTTATCAACTTTTTTATTTTTGAGTTTGTAAGAAGATATATAAGCGATATTTTTACACTTCCTTT CAGCGTGGCGGCGACTGCGTCGGTGGTTGGAGTAGTCTTTGTTTCAGCTAGTAGGATATATTGGTTTTCAAGACATTCTC GAAATTATAAAAAGCGGTTAAACGGAATTAAAAATATTCTTATAATAGGAGCAGGCGATGCAGGAACAGAATTGTTGGGG GAATACGAAAGGCATCCAGAAGAGGGATCAGTTGTAGGCTTTTTGGATGATGATCCAGAAAAGATAGGAAGAAACATTCG AGGCTATCCTGTACTGGGGAAAATAAACCAAGTTATGGATTTTGTTGAAAAATACAATGTTGAAGAGGTTATAATAGCTA TTCCTAGCGCTTCATCAGATCAGATAAAAAAAATCATAGATTATGTTGATACATCGAAGGTTAGATTAAAAACTTTGCCA GGAATCTTGGAAATTTTAGATAACAAGTTATCACTTGGCTTTCTACGAGAGGTCGATATTTCCGATTTATTAGGTAGAAA GGAAGTTAGCGTTGATTTAAAAGAGATAAAAGATTACATAAAAGGCAAAAAAATACTGGTTACTGGTGCAGGGGGAAGTA TAGGTTCTGAAATATGTAGACAGGTTTTACCAATGGGTCCCAAAGCTCTTTTCTTGCTTGGAAAAGGTGAAAACAGTATT TTTGAAATATCGAATGAACTGAAAGACAAATTTTCAGATGCCTTTATAGAAGAAATTATCGCAGATGTATCCGATGAAAA TAGAATGAGGTATTTATTTTCAAAATATAGATTTGATGTTGTTTTTCATGCTGCTGCTCATAAACATGTACCCCTCATGC AAAAAAATCCAACAGAAGCCTTCAGGGTCAACACAATTGGGACTTACACTGTTGCAAAACTTTCAGGGGAATACAATGTA GAAAGATTCGTTTTTATTTCCACCGACAAAGCCATCAAACCAACATCCATTATGGGTGCTTCAAAGAGACTTGGGGAAAT TATAGTAAAGACAATGTCTAATTTTTATCAAACAAAGTATGGAATTGTAAGGTTCGGGAACGTTTTGGGAAGTAGAGGGA GTGTAATTCCAATTTTCAAAGAACAGATACAAAAGGGTGGTCCCGTTACTGTCACACATCCCAATATGAAAAGGTATTTC ATGACTATTCCGGAGGCTGTCTCTTTAGTATTACAATGTGGACAGTTCGCTCAAAAGGCTGAAATATTTGTTTTAGAAAT GGGAGCGCCTGTCAATATTGATCGATTAGCAAGGGATTTGATCAGACTTTCCGGGTATATCCCTGATCAAGACATTAAAA TAGTTTATACAGGCATCAGGCCTGGTGAGAAATTATACGAAGAAATATTTTTGGAAGATGAAGATTACGAAAAAACTAGA AACAGACGAATCTTTATTTCAAAATCCAACAATCACGAAATAAATAAAGAGAAGCTAAATGAATTGATAGATCGAATAAA TATAATGATAAAAAATCATGATTACAACAGTGTTATTGAGATAATAAAAGATTACATACCAGATTCAAATATATCAAAGA TCAGCGAAGAAACTCAATGA Protein sequence : MKHLSKRSFRLMIIDYILFFLAYIVAMFIRFQFDFVEMRKYISPIFFFPLIMVIVFYYSGIYRYIWRFATLNELRPVFNS GFIGFLINFFIFEFVRRYISDIFTLPFSVAATASVVGVVFVSASRIYWFSRHSRNYKKRLNGIKNILIIGAGDAGTELLG EYERHPEEGSVVGFLDDDPEKIGRNIRGYPVLGKINQVMDFVEKYNVEEVIIAIPSASSDQIKKIIDYVDTSKVRLKTLP GILEILDNKLSLGFLREVDISDLLGRKEVSVDLKEIKDYIKGKKILVTGAGGSIGSEICRQVLPMGPKALFLLGKGENSI FEISNELKDKFSDAFIEEIIADVSDENRMRYLFSKYRFDVVFHAAAHKHVPLMQKNPTEAFRVNTIGTYTVAKLSGEYNV ERFVFISTDKAIKPTSIMGASKRLGEIIVKTMSNFYQTKYGIVRFGNVLGSRGSVIPIFKEQIQKGGPVTVTHPNMKRYF MTIPEAVSLVLQCGQFAQKAEIFVLEMGAPVNIDRLARDLIRLSGYIPDQDIKIVYTGIRPGEKLYEEIFLEDEDYEKTR NRRIFISKSNNHEINKEKLNELIDRINIMIKNHDYNSVIEIIKDYIPDSNISKISEETQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-78 | 45 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 2e-78 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pmob_1801 | YP_001568813.1 | polysaccharide biosynthesis protein CapD | VFG1300 | Protein | 5e-83 | 48 |
