Gene Information

Name : Pmob_1376 (Pmob_1376)
Accession : YP_001568403.1
Strain : Petrotoga mobilis SJ95
Genome accession: NC_010003
Putative virulence/resistance : Virulence
Product : flagellar protein export ATPase FliI
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : 3.6.3.15
Position : 1481921 - 1483249 bp
Length : 1329 bp
Strand : +
Note : KEGG: tme:Tmel_1269 flagellar protein export ATPase FliI; TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subuni

DNA sequence :
ATGCAAATAAATGATTTTTCTTCATCTTTAGCTTATTTTACTGATAAATTAAAAAATAGACCTTTATTTGAACTAGAAGG
TAAAATTAGTAGGATAGTAGGTGTTACTATTGAATCAATCGGTCCCAGTGTGGCTTTGGGGGATCTATGTAGGATAAAAT
TGAAAGATGGTTCAAAGATTTTTGCAGAAACCGTAGGTTTTTCCGATAACAAAGTGCTTTTAATGCCATTAGAGGATGTA
AGTGGAATCTATGTGGGAGCACCGGTAGAAAGAGTAGATAGTAAAATCAACGTGAAAATTAGCTCAGATCTCTTAGGACA
TGTGTTGGATGGTTTAGGAAGATCAATGGATGGTTCAAAAGTAAAGAGTTACGAAAGTAAAAGTATATATAGATCTGCCC
CCAACCCTCTTTTAAGAAACAGAATTAAAGAACCTTTATCTGTAGGAGTGAGGGCAATCGATGCTTTTTTAACCCTTGGT
AAAGGTCAAAGAATTGGAATAATGGCAGGGAGCGGTGTAGGAAAAAGTACCTTACTGGGAATGATAGCCAGGAATACCGA
AGCAGATATTAACGTCATTGGGTTGATAGGAGAAAGGGGAAGAGAAGTTAAAGATTTTATTGAAAAAGATCTTGGGGAAG
AAGGATTGAAAAAATCTGTTTTAATAGTTTCAACTTCAGACTCACCTGCTCTACTAAGAGTAAAAGCTCTTTACACAGCC
ACCACTATCGCAGAGTATTTTAGAGATTTAGGTTACAATGTTTTAATGATGGTCGATTCAATCACTAGATGGGCTATGGC
TCAAAGAGAGATTGGACTTTCCATAGGTGAACCACCAACCACCAGAGGATACACACCCAGCGTCTTTGCAAATATGCCAA
AAATTTTAGAAAGAGCTGGTAACTCACAAAAAGGAAGTATGACCGCTATCTACACCGTACTGGTTGAAGCCGATGATATG
AACGATCCAATTGGTGACGCTGTAAGAAGTATAGTCGATGGTCATATTGTTCTTTCAAGAAGCCTCGCAGATTCTTCGCA
TTATCCCCCAATAGATATCCTTTCCAGTGTAAGTAGGTTGATGAAAGAAGTAGTAGATGAAAAACACCTTAAAGCAGCAA
TGTTTATTAGAGATATTTACGCAAGTTATATGAATTCCAAGGATTTAATCGAAGTTGGTGCGTATAAGAAGGGAAGCAAT
AAAAAAGTAGATATTGCTTTGGAAGAAATAGAAAATATAAATAATTTTTTAACACAGAGAATAGAAGAAAAAGCGCCTTT
TGAACAAACGTTGAAAAAGTTAGTCGAAATATACCAAAGGTACAACTAG

Protein sequence :
MQINDFSSSLAYFTDKLKNRPLFELEGKISRIVGVTIESIGPSVALGDLCRIKLKDGSKIFAETVGFSDNKVLLMPLEDV
SGIYVGAPVERVDSKINVKISSDLLGHVLDGLGRSMDGSKVKSYESKSIYRSAPNPLLRNRIKEPLSVGVRAIDAFLTLG
KGQRIGIMAGSGVGKSTLLGMIARNTEADINVIGLIGERGREVKDFIEKDLGEEGLKKSVLIVSTSDSPALLRVKALYTA
TTIAEYFRDLGYNVLMMVDSITRWAMAQREIGLSIGEPPTTRGYTPSVFANMPKILERAGNSQKGSMTAIYTVLVEADDM
NDPIGDAVRSIVDGHIVLSRSLADSSHYPPIDILSSVSRLMKEVVDEKHLKAAMFIRDIYASYMNSKDLIEVGAYKKGSN
KKVDIALEEIENINNFLTQRIEEKAPFEQTLKKLVEIYQRYN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
escN AAC38383.1 EscN Virulence LEE Protein 1e-90 50
lscN AAO18044.1 LscN Virulence TTSS locus Protein 1e-100 49
escN CAI43874.1 EscN protein Virulence LEE Protein 3e-91 49
unnamed AAL06369.1 EscN Virulence LEE Protein 2e-89 49
escN YP_003223475.1 translocator EscN Virulence LEE Protein 5e-91 49
escN CAC81862.1 EscN protein Virulence LEE II Protein 7e-91 49
escN AAC31513.1 L0034 Virulence LEE Protein 3e-90 49
escN NP_290268.1 hypothetical protein Virulence LEE Protein 4e-90 49
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 3e-90 49
ECs4568 NP_312595.1 EscN Virulence LEE Protein 4e-90 49
escN YP_003236088.1 translocator EscN Virulence LEE Protein 2e-90 49
escN AAK26715.1 EscN Virulence LEE Protein 1e-90 49
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 7e-91 49
escN AAL57542.1 EscN Virulence LEE Protein 1e-90 49
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 3e-87 48
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 3e-87 48
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 9e-92 47
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-92 47
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 6e-92 47
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 8e-93 47
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 6e-93 47
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 6e-93 47
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 2e-93 47
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 6e-87 47
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-88 46
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-88 46
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 1e-85 46
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 3e-75 44
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 1e-75 44
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 7e-82 44
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-81 44
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 8e-82 44
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 5e-82 44
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 5e-82 44
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 1e-89 44
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 8e-83 44
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 7e-83 44
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 4e-76 44
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 4e-76 44
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 1e-82 43
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 6e-76 43
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 4e-74 43
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 4e-74 43
ysaN AAS66842.1 YsaN Not tested SSR-1 Protein 5e-69 42
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 4e-64 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pmob_1376 YP_001568403.1 flagellar protein export ATPase FliI VFG0730 Protein 6e-91 50
Pmob_1376 YP_001568403.1 flagellar protein export ATPase FliI VFG0192 Protein 2e-100 49
Pmob_1376 YP_001568403.1 flagellar protein export ATPase FliI VFG0390 Protein 2e-98 49
Pmob_1376 YP_001568403.1 flagellar protein export ATPase FliI VFG0812 Protein 2e-90 49
Pmob_1376 YP_001568403.1 flagellar protein export ATPase FliI VFG2144 Protein 2e-104 48
Pmob_1376 YP_001568403.1 flagellar protein export ATPase FliI VFG1254 Protein 2e-92 47
Pmob_1376 YP_001568403.1 flagellar protein export ATPase FliI VFG0048 Protein 1e-96 47
Pmob_1376 YP_001568403.1 flagellar protein export ATPase FliI VFG2331 Protein 1e-84 46
Pmob_1376 YP_001568403.1 flagellar protein export ATPase FliI VFG2499 Protein 1e-88 46
Pmob_1376 YP_001568403.1 flagellar protein export ATPase FliI VFG0515 Protein 4e-82 44