Gene Information

Name : Daci_0938 (Daci_0938)
Accession : YP_001561969.1
Strain : Delftia acidovorans SPH-1
Genome accession: NC_010002
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0021
EC number : -
Position : 1048860 - 1050905 bp
Length : 2046 bp
Strand : +
Note : TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: ajs:Ajs_3959 transketolase

DNA sequence :
ATGGCCAACACTCAACAAATGGCGAATGCGATCCGCGCACTCGCAATGGATGCCGTTCAACAAGCCAACTCCGGCCACCC
CGGCGCCCCCATGGGCATGGCCGACATGGCCGTGGCACTGTGGAGCCGTCACCTCAAGCACAACCCCGTCAACCCGCAAT
GGGCTGACCGTGACCGCTTCATCCTGTCCAACGGCCACGGCTCCATGCTGATCTACGCGCTGCTGCACCTCACGGGCTAT
GCGCTGCCGATCGACGAGCTCAAGAACTTCCGCCAGCTGCACAGCAAGACGGCCGGCCACCCCGAAGTGGGCATCACCCC
CGGCGTGGAAACCACCACCGGCCCGCTGGGCCAGGGCATCACCAATGCCGTGGGCTTCGCGCTGGCAGAAAAGCTGCTGG
CTGCCGAATTCAACCGTCCCGGCCACGCCATCGTCGACCACCACACCTACGTGTTCCTGGGTGACGGCTGCCTGATGGAA
GGCATCAGCCACGAGGCCGCGGCCCTGGCCGGCGCCTGGAAGCTGGGCAAGCTGGTGGCGCTGTACGACGACAACGGCAT
CTCCATCGACGGCAAGGTCGCCCCCTGGTTCATCGACAACACGCCCGCCCGCTTCGAAGCCTATGGCTGGAACGTGATCC
GCGACGTGGACGGCCACAACGTCCAGGCCCTCGATGCCGCCATCGCCGCTGCCAAGAAGAACAGCTCCAAGCCCACCCTG
ATCTGCTGCAAGACCAGCATCGGCAAGGGCTCGCCCAACCGCCAGGACACGGCCAAGGCCCACGGCGAGCCCCTGGGCGC
CGAGGAAATCGCGCTGACCCGCGCGGCCCTGGGCTGGGAGCACGGCCCTTTCGACATCCCCGCCAGCGTCTACGGCGACT
GGGATGCCAAGGCCGCCGGCGCCAAGGCTGAAGCGGCCTGGAACAAGAAGTTCGCCGCCTACGCCAAGGCCTTCCCCGAA
CTGGCTGCCGACTTCACGCGCCGCATGGCCGGCGACCTGCCTGCCAACTTCGGCGAGATCGCCGCGCAGATCGCCTCCGA
CGCGCATGACGCAGGCGCCACCGTGGCCAGCCGCAAGGCCAGCCAACTGGCCCTGGAAGGCCTGACCGCAGCCCTGCCCG
AACTGCTGGGCGGCTCGGCCGACCTGACCGGCTCCAACCTGACCAACACCAAGAGCACGCCTTCGCTGCGCGTGGACGAC
AAGGGTGCCGTGGTCCTGACCGAAGACGGCAAGATCGGCCGCCACATCAACTACGGTGTGCGCGAGTTCGGCATGGCCGC
CATCATGAACGGCATCGCCCTGCATGGCGGCTACATCCCCTACGCAGGCACCTTCCTGACCTTCAGCGACTACAGCCGCA
ACGCCATCCGCATGGCCGCGCTGATGAAGCAGCGCGTGGTCCACGTCTTCACGCACGACTCCATCGGCCTGGGCGAAGAC
GGCCCCACCCACCAGTCCATCGAGCACGCCGCCTCGCTGCGCCTGATCCCTGGCCTGGATGTCTGGCGCCCTGCCGACAC
CACGGAAACCGCCGTCGCCTGGACCGTGGCCCTGAGCCAGAAGAACAAGCCCACGGCCCTGCTGCTGTCGCGCCAGAACC
TGGCCTACGCAGCCAAGACCGAAGACGCGCTGGACGACATCGCCTGCGGCGCCTACGTGCTGTCCGAGCCCAAGGCCGTC
GGCCTGAACAAGAAGGCCCAGGCCGTCATCATCGCCACCGGCTCCGAGGTGCAACTGGCCCTGGCAGCCCAGAAGCTGCT
GGCCGAGCGCAAGGTCGCCGTGCGCGTGGTCTCCATGCCCAGCACCACCACCTTCGACAAGCAGGACGCCAAGTACAAGA
GCCAGGTGCTGCCGGCCAACCTGCCGCGCATCGCCGTGGAAATGGGCGTGACCGACTTCTGGTGGAAGTACGGCTGCGCC
GCCGTCGTCGGCATCGACACCTACGGCGAATCGGCCCCCGCGCCCGTGCTGTTCAAGCACTTCGGCTTCACGGCAGAGAA
CGTGGCCGACACCGTGCAGGCTGCGCTGCAGCGCGCCGGCAAGTAA

Protein sequence :
MANTQQMANAIRALAMDAVQQANSGHPGAPMGMADMAVALWSRHLKHNPVNPQWADRDRFILSNGHGSMLIYALLHLTGY
ALPIDELKNFRQLHSKTAGHPEVGITPGVETTTGPLGQGITNAVGFALAEKLLAAEFNRPGHAIVDHHTYVFLGDGCLME
GISHEAAALAGAWKLGKLVALYDDNGISIDGKVAPWFIDNTPARFEAYGWNVIRDVDGHNVQALDAAIAAAKKNSSKPTL
ICCKTSIGKGSPNRQDTAKAHGEPLGAEEIALTRAALGWEHGPFDIPASVYGDWDAKAAGAKAEAAWNKKFAAYAKAFPE
LAADFTRRMAGDLPANFGEIAAQIASDAHDAGATVASRKASQLALEGLTAALPELLGGSADLTGSNLTNTKSTPSLRVDD
KGAVVLTEDGKIGRHINYGVREFGMAAIMNGIALHGGYIPYAGTFLTFSDYSRNAIRMAALMKQRVVHVFTHDSIGLGED
GPTHQSIEHAASLRLIPGLDVWRPADTTETAVAWTVALSQKNKPTALLLSRQNLAYAAKTEDALDDIACGAYVLSEPKAV
GLNKKAQAVIIATGSEVQLALAAQKLLAERKVAVRVVSMPSTTTFDKQDAKYKSQVLPANLPRIAVEMGVTDFWWKYGCA
AVVGIDTYGESAPAPVLFKHFGFTAENVADTVQAALQRAGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 3e-179 59
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 5e-172 58