Gene Information

Name : Daci_0726 (Daci_0726)
Accession : YP_001561757.1
Strain : Delftia acidovorans SPH-1
Genome accession: NC_010002
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 803822 - 804514 bp
Length : 693 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pfo:Pfl_3855 two component heavy metal response transcriptional regulator, winged helix family

DNA sequence : 
ATGAAGATCCTGATCGTGGATGCCCACCCGCCATCGGCGCAGTACCTGTGCCAGGGCCTGTGCCAGGACGGATTCAACGT
GGATGTCGTGCATGACGGTCTGCAGGGCCGCAACCTCGCACTGAGCCGCGCCTACAGCCTGCTCGTGCTGGATCTGGACC
TGCCTGGCCAGAGCGGGCGTGCGGTCCTGCAGACCCTGCTGCAGGCGGGCGACACGCCCACCATCGTGGTCACCGCAAAC
GACAGTCTGGAGGACCAGGTGTTCTGCCTGCAGAACGGCGCCGATGACTACCTGGTCAAACCCGTCAGGTTGCCGGTGTT
CCTGGCCCGTGCACGGCTGCGGATGCGAGGCTCTGCCGGCCAGGAGGGCCTGCGCCTGACATTGGCGGACCTGGTGCTGG
ACCTGTCGAAGAAGCGGGTCGAGCGTGCCGGCCGGCGACTGGACCTCACTCGCCAGGAATTCGCCGTGCTGTGGCTGCTG
CTGCAGCGCCAGGGCGATGTGGTCACGCGCGCCGAACTGGTGCAGCAGGTCTGGAGCCTGCCCGTCGATGCGCTGAACAA
CGTGGTGGATGTGGCGGTGTGCAGGCTGCGCAGCAAGCTCGATGATCCCTATGCGGTCAAGCTGCTGCACACGGTGCGCG
GCATGGGCTACCTGCTGGCGTTGCGCGACGGGGATCCGGCCAAGCAGCCCTGA

Protein sequence : 
MKILIVDAHPPSAQYLCQGLCQDGFNVDVVHDGLQGRNLALSRAYSLLVLDLDLPGQSGRAVLQTLLQAGDTPTIVVTAN
DSLEDQVFCLQNGADDYLVKPVRLPVFLARARLRMRGSAGQEGLRLTLADLVLDLSKKRVERAGRRLDLTRQEFAVLWLL
LQRQGDVVTRAELVQQVWSLPVDALNNVVDVAVCRLRSKLDDPYAVKLLHTVRGMGYLLALRDGDPAKQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 8e-35 46
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 7e-34 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Daci_0726 YP_001561757.1 two component transcriptional regulator BAC0083 Protein 6e-36 47
Daci_0726 YP_001561757.1 two component transcriptional regulator BAC0638 Protein 1e-29 46
Daci_0726 YP_001561757.1 two component transcriptional regulator BAC0197 Protein 7e-39 45
Daci_0726 YP_001561757.1 two component transcriptional regulator BAC0125 Protein 2e-37 45
Daci_0726 YP_001561757.1 two component transcriptional regulator BAC0111 Protein 6e-34 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Daci_0726 YP_001561757.1 two component transcriptional regulator VFG0596 Protein 3e-35 46