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Name : fliP (Daci_0648) Accession : YP_001561679.1 Strain : Delftia acidovorans SPH-1 Genome accession: NC_010002 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein FliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : 3.1.1.3 Position : 710864 - 711649 bp Length : 786 bp Strand : + Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus DNA sequence : ATGTCTGAATATTCCTGCAAGCGCCCGGCGCGCACGCTGAGCCAGGCCGCTGGCGCCGCAGCGCTGGCGCTGTGCTGCGC CACGCCCCTGGCCTCCTGGGCACAGGGCGCGCCCGCCAGCCTTCCGCTGGTCATCGGCCAGGGCAGCGGTGGCACCAGCT TTTCGGTGCCCATCCAGACCCTGCTGTTCTTCACGGCGCTGTCCTTCCTGCCGGCCATCCTTTTGATGATGACGGGCTTC ACCCGCATCGTCATCGTGCTGTCGCTGATGCGCCAGGCGCTGGGCACGCAGTCGGCGCCGCCCAACCAGGTGATCATCGG CCTGTCGCTGTTCCTGACGCTGTTCGTCATGGGCCCCACCCTGGACCGCGTGTACCAGGAGGCCTACGTGCCCTACACCA CGAATGCCGTGACCTTCGAGCAGGCCATTGAGAAGGCCGAGGCGCCCATGCGCGACTTCATGCTCAAGCAGACGCGCCAG TCGGACTTTGCGCTGTTCGCACGGCTGGCCAAGCTCGATGCAGGCGTCACCAGCGAGACCGCACCGCTGCGCGTGCTGGT GCCCGCCTTCGTGACCAGCGAGCTGAAGACCGCGTTCCAGATCGGCTTCATGATCTTCATCCCCTTCCTGGTCATCGACA TGGTCGTGTCCTCGATCCTGATGTCCCTGGGCATGATGATGCTGTCGCCCGTGCTGGTGGCCCTGCCGTTCAAGCTCATG CTCTTCGTGCTGGCGGATGGCTGGAACCTGCTCATAGGCTCGCTGGCGGCCAGCTTCGCCGTCTAG Protein sequence : MSEYSCKRPARTLSQAAGAAALALCCATPLASWAQGAPASLPLVIGQGSGGTSFSVPIQTLLFFTALSFLPAILLMMTGF TRIVIVLSLMRQALGTQSAPPNQVIIGLSLFLTLFVMGPTLDRVYQEAYVPYTTNAVTFEQAIEKAEAPMRDFMLKQTRQ SDFALFARLAKLDAGVTSETAPLRVLVPAFVTSELKTAFQIGFMIFIPFLVIDMVVSSILMSLGMMMLSPVLVALPFKLM LFVLADGWNLLIGSLAASFAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ssaR | NP_460384.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 4e-25 | 42 |
| yscR | NP_456109.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 2e-24 | 42 |
| yscR | NP_805090.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 2e-24 | 42 |
| ssaR | CAA68199.1 | secretion system apparatus, SsaR | Virulence | SPI-2 | Protein | 3e-25 | 42 |
| ssaR | YP_216427.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 4e-25 | 42 |
| ECs4583 | NP_312610.1 | type III secretion system protein | Virulence | LEE | Protein | 3e-23 | 41 |
| escR | AAK26700.1 | EscR | Virulence | LEE | Protein | 6e-24 | 41 |
| escR | YP_003223490.1 | T3SS structure protein EscR | Virulence | LEE | Protein | 8e-24 | 41 |
| escR | AAL57527.1 | EscR | Virulence | LEE | Protein | 6e-24 | 41 |
| escR | YP_003232138.1 | type III secretion system protein | Virulence | LEE | Protein | 8e-24 | 41 |
| escR | CAC81847.1 | EscR protein | Virulence | LEE II | Protein | 6e-24 | 41 |
| escR | YP_003236103.1 | T3SS structure protein EscR | Virulence | LEE | Protein | 7e-24 | 41 |
| escR | CAI43889.1 | EscR protein | Virulence | LEE | Protein | 6e-24 | 41 |
| escR | NP_290283.1 | type III secretion system protein | Virulence | LEE | Protein | 7e-24 | 41 |
| escR | AAC31528.1 | L0049 | Virulence | LEE | Protein | 5e-24 | 41 |
| escR | ACU09473.1 | type III secretion system protein EscR | Virulence | LEE | Protein | 5e-24 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliP | YP_001561679.1 | flagellar biosynthesis protein FliP | VFG2494 | Protein | 7e-61 | 65 |
| fliP | YP_001561679.1 | flagellar biosynthesis protein FliP | VFG2338 | Protein | 8e-62 | 64 |
| fliP | YP_001561679.1 | flagellar biosynthesis protein FliP | VFG1259 | Protein | 6e-56 | 60 |
| fliP | YP_001561679.1 | flagellar biosynthesis protein FliP | VFG2016 | Protein | 4e-49 | 51 |
| fliP | YP_001561679.1 | flagellar biosynthesis protein FliP | VFG0519 | Protein | 2e-25 | 42 |
| fliP | YP_001561679.1 | flagellar biosynthesis protein FliP | VFG0394 | Protein | 5e-23 | 41 |
| fliP | YP_001561679.1 | flagellar biosynthesis protein FliP | VFG0827 | Protein | 3e-24 | 41 |
