Gene Information

Name : Daci_5923 (Daci_5923)
Accession : YP_001566936.1
Strain : Delftia acidovorans SPH-1
Genome accession: NC_010002
Putative virulence/resistance : Unknown
Product : K+-transporting ATPase subunit B
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2216
EC number : -
Position : 6591028 - 6593112 bp
Length : 2085 bp
Strand : -
Note : TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase, B subunit; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: pfl:PFL_4571 K+-transporting ATPase, B subunit

DNA sequence :
ATGTCGCGCAAAACTGCTTTGTCCCTGTTCGATCCTTCGCTGGTGCGCCAGGCGCTGGGTGACTCCATCCGCAAGCTGGC
ACCCAGCGCGCAATGGCGCAACCCGGTGATGTTCGTGGTCTACCTGGGCGCCATCTTCACCAGCCTGCTCTGGGCCCAGG
CCCTGGCGGGCGAAGGCGAAGCGCCTGCGGGCTTCATCCTGGCGATTGCGCTGTGGCTGTGGTTCACCGTGCTGTTCGCC
AACTTTGCGGAGGCGCTGGCCGAGGGGCGCAGCCGCGCCCAGGCCGCCAGCCTGCGCAGCATGAAGCGCAGCACCATCGC
CAAGAAGCTGGAGCAGGCCAACTACCAGAGCCGCTGGCACCCCGTGGGTGCCGAAGAACTGCGTTCGGGCATGTGGGTGC
TGGTGGAGGCCGGCGACACCGTGCCGCTGGACGGCACCGTGATCGAGGGCGTGGCCTCGGTGGACGAGAGCGCCATCACC
GGCGAATCGGCCCCCGTGATCCGCGAGGCCGGTGGTGACTTCTCTTCGGTCACGGGTGGCACGCGCGTGCTGTCGGACTG
GCTGGTGGTGCAGATCACCGTCAATCCCGGCGAGTCCTTCCTGGACCGCATGATCTCCATGGTGGAGTCGGCCCGCCGCC
ACAAGACGCCCAACGAGCTGGCGCTGACCATTTTGCTGGTCGGGCTGACGCTGCTGTTCCTGCTGGTCATCGTCACGCTG
CGGCCCTATTCGTCCTTTGCGGTGGAGCTGACGGGCAGCGGCCAGGTCGTGGGACTGACGGTGCTGATCGCCCTGCTGGT
GTGCCTGATCCCGACCACCATCGGCGGCCTGCTGTCGGCCATTGGCGTGGCGGGCATGAGTCGCATGATGCAGGCCAACG
TGATCGCCACCTCGGGCCGCGCCGTGGAGGCGGCCGGCGACGTGGACGTGCTGCTGCTGGACAAGACCGGCACCATCACG
CTGGGCAACCGCCAGGCCAGCGAGTTCCTGCCCGCGCCCGGCGTGACGGCCGCGCAGCTGGTGGATGCGGCGCAGCTGGC
CTCGCTGGCCGACGAGACGCCTGAAGGCCGCAGCGTGGTCGTGCTGGCCAAGGAGATGCATGGCCTGCGCGAGCGCGACC
TGGCCACGCTGCATGCGGTCTTCGTGCCCTTCACGGCCCAGACGCGCATGAGTGGCGTGGACATGCCCCAGCCGGACGGC
GCCACGCGCAGCCTGCGCAAGGGCGCGGCCGACGCCGTGCGCCGCCACGTTGAATCCCTGGGCGGCCAGTTCCCGCCCGC
CATGCTCAAGGTGGTGGAGGATGTGTCGCGGCGCGGCAGCACGCCGCTGGTCGTGGCCGACGGTGCCCGCGTGCTTGGCG
TGATCGAGCTCAAGGACGTGGTCAAGCACGGCATACGCGAACGCTTTGCCGAGCTGCGCCGCATGGGCATCAAGACCGTG
ATGATCACGGGCGACAACCCGCTCACGGCGGCGGCCATTGCGGCCGAGGCCGGCGTGGACGACTACCTGGCCGAAGCCAC
GCCCGAGGACAAGCTGCGCCTGATCCGCGAACACCAGGCCGCAGGCCGCCTGGTGGCCATGACCGGCGACGGCACCAATG
ACGCGCCCGCGCTGGCCCAGGCCGACGTGGCCGTGGCCATGAACAGCGGCACCCAGGCGGCCAAGGAGGCCGGCAACATG
GTGGACCTGGACAGCAACCCGACCAAGCTCATCGAGGTCGTGGAGACCGGCAAGCAGATGCTGATGACGCGCGGCGCGCT
GACCACCTTCAGCGTGGCCAACGACGTGGCCAAGTACTTCGCCATCATCCCGGCCGCCTTCGTGGGCACCTATCCGCAGC
TGTCGGCGCTCAACGTCATGGGTCTGGCCAGCCCGGGCTCGGCCATCCTGAGTGCCGTGATCTTCAACGCGCTGATCATC
ATCGTGCTGATACCGCTGGCCCTGCGCGGCGTGCCCTACCGCGCCATCGGCGCCTCGGCCCTGTTGCGGCGCAACCTGCT
GATCTACGGCCTGGGTGGCCTGGTCGTTCCCTTCATCGGCATCAAGCTGATCGACATGCTGCTGGTGGCTCTGAACCTGG
CGTGA

Protein sequence :
MSRKTALSLFDPSLVRQALGDSIRKLAPSAQWRNPVMFVVYLGAIFTSLLWAQALAGEGEAPAGFILAIALWLWFTVLFA
NFAEALAEGRSRAQAASLRSMKRSTIAKKLEQANYQSRWHPVGAEELRSGMWVLVEAGDTVPLDGTVIEGVASVDESAIT
GESAPVIREAGGDFSSVTGGTRVLSDWLVVQITVNPGESFLDRMISMVESARRHKTPNELALTILLVGLTLLFLLVIVTL
RPYSSFAVELTGSGQVVGLTVLIALLVCLIPTTIGGLLSAIGVAGMSRMMQANVIATSGRAVEAAGDVDVLLLDKTGTIT
LGNRQASEFLPAPGVTAAQLVDAAQLASLADETPEGRSVVVLAKEMHGLRERDLATLHAVFVPFTAQTRMSGVDMPQPDG
ATRSLRKGAADAVRRHVESLGGQFPPAMLKVVEDVSRRGSTPLVVADGARVLGVIELKDVVKHGIRERFAELRRMGIKTV
MITGDNPLTAAAIAAEAGVDDYLAEATPEDKLRLIREHQAAGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAAKEAGNM
VDLDSNPTKLIEVVETGKQMLMTRGALTTFSVANDVAKYFAIIPAAFVGTYPQLSALNVMGLASPGSAILSAVIFNALII
IVLIPLALRGVPYRAIGASALLRRNLLIYGLGGLVVPFIGIKLIDMLLVALNLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 1e-171 61
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 9e-172 61
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 7e-142 55
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 5e-141 55
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 5e-141 55
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 4e-141 55
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 5e-141 55
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 5e-141 55