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Name : Daci_5698 (Daci_5698) Accession : YP_001566711.1 Strain : Delftia acidovorans SPH-1 Genome accession: NC_010002 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 6334838 - 6336199 bp Length : 1362 bp Strand : + Note : KEGG: aav:Aave_0916 general secretory pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase DNA sequence : ATGCGCTATCCCCTGCCCTATGCGTTTGCGCGCACCAGCCAGCTGCTGATCGAGGACGACGGCCACGAGCCCCTGCTCTG GCACGGCCCCTCGCCCGACTGGCAGGCCCTGTCCGAAGTCCAGCGCAAGCATGCGGTGCAGCGCTGGCAGATGCTGGATG CGGGCACGCTGGCGCACCGCATCAGCGCCGCCTATTCGCAGGGCGAATCCAGCGCGGCCCTGGTGGTCAGCGAGGTCGAG TCCGACGCCGACCTCTCGCGCATGATGCAGGAGCTGCCCGCCGTCGAGGACTTGCTGGAGACTGCGGACGACGCGCCCAT CATCCGCATGCTCAACGCCCTGCTCACGCAGGCCGCGCGCGACGGCGCCAGCGACATCCACATCGAGCCCTACGAGCGCC ACTCCAGCGTGCGCTTTCGCGTGGACGGCGACCTGCGGGAGGTCGTGCAGCCCAACCGGGCCCTGCACGCGGCGCTGATC TCGCGCCTGAAGATCATGGCCGACCTGGACATCGCCGAAAAGCGGCTGCCCCAGGACGGCCGCATCAGCCTGCGCCTGGG CACGCGCGCCATCGACGTGCGCGTCTCCACCCTGCCCAGCGCCCATGGCGAGCGCGCCGTGCTGCGCCTGCTGGACAAGA GCGAGAGCAAGCTCAGCCTGGAGGCCGTGGGCATGCAGGGCGAGACGCTGAGGCGGTTCACCCACATGACGGCCCAGCCC CACGGCATCGTGCTGGTCACCGGCCCCACGGGCTCGGGCAAGACCACCACGCTGTACGCGGCGCTGTCGCGCATGGACGC CAGCCGCAGCAACATCATGACGGTGGAGGACCCCATCGAGTACGAGCTGGCCGGCGTGGGGCAGACCCAGGTCAACGCCA AGATCGACCTGACCTTCGCCAAGGCCCTGCGCGCCATCCTGCGCCAGGATCCGGACGTGATCATGATCGGCGAAATCCGC GACTTCGAGACCGCGCAGATCGCCATCCAGGCCTCGCTGACGGGCCACCTGGTGCTGGCCACGCTGCACACCAACGATGC CTCCAGCGCCGTCACACGCCTGATCGACATGGGCGTGGAGCCGTTCCTGCTGTCGTCCTCCCTGCTGGGCGTGCTGGCCC AGCGCCTGGTGCGCAAGATCGACACCACCGAGCCCAGCGGCTACCGGGGGCGCACCGGCATCTTCGAGATGCTGGTGGTG GACGACACCATCCGCGCGCAGATCCATCGCCAGGCCAGCGAGGCCGAGATCCGCGACACCGCGCTGGCCTCGGGCATGCG CCTGATGCGCGACGATGGCGAGCGCCTGGTGCGCGAGGGCATCACCACGCCCGAGGAAGTGCTGCGCGTCACGCGCGACT AG Protein sequence : MRYPLPYAFARTSQLLIEDDGHEPLLWHGPSPDWQALSEVQRKHAVQRWQMLDAGTLAHRISAAYSQGESSAALVVSEVE SDADLSRMMQELPAVEDLLETADDAPIIRMLNALLTQAARDGASDIHIEPYERHSSVRFRVDGDLREVVQPNRALHAALI SRLKIMADLDIAEKRLPQDGRISLRLGTRAIDVRVSTLPSAHGERAVLRLLDKSESKLSLEAVGMQGETLRRFTHMTAQP HGIVLVTGPTGSGKTTTLYAALSRMDASRSNIMTVEDPIEYELAGVGQTQVNAKIDLTFAKALRAILRQDPDVIMIGEIR DFETAQIAIQASLTGHLVLATLHTNDASSAVTRLIDMGVEPFLLSSSLLGVLAQRLVRKIDTTEPSGYRGRTGIFEMLVV DDTIRAQIHRQASEAEIRDTALASGMRLMRDDGERLVREGITTPEEVLRVTRD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-88 | 50 |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 4e-88 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Daci_5698 | YP_001566711.1 | general secretory pathway protein E | VFG0182 | Protein | 9e-101 | 53 |
| Daci_5698 | YP_001566711.1 | general secretory pathway protein E | VFG1876 | Protein | 3e-100 | 51 |
| Daci_5698 | YP_001566711.1 | general secretory pathway protein E | VFG2048 | Protein | 6e-89 | 49 |
| Daci_5698 | YP_001566711.1 | general secretory pathway protein E | VFG2426 | Protein | 5e-58 | 45 |
