Gene Information

Name : Daci_5423 (Daci_5423)
Accession : YP_001566437.1
Strain : Delftia acidovorans SPH-1
Genome accession: NC_010002
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 6020975 - 6021694 bp
Length : 720 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pol:Bpro_0237 two component transcriptional regulator, winged helix family

DNA sequence : 
ATGCAAGGCTTGCCGATGACGAACGCCCCGCGTGTGTTGCTGGTGGAGGACGACCCCGCCATCGCACGCACCGTCTGCTA
TGCGCTGGAGCGCGACGGCATCGCCGTGCGCCACTGCCTGCAGCTGGCCGATGCACGCGCGCAATGGCAGGCACAGCCGC
CCGATGCCCTGCTGCTGGACGTGGGCCTGCCCGACGGCAACGGCCTGGACTGGTGCCGCGAGTTGCGCCAGGCCGGCGCC
GCCGTGCCGCTGCTGGTGCTCAGCGCACGCGGCGAGGAAATGGACCGCGTGCTGGGCCTGGAGCTGGGCGCCGATGACTA
CCTGACCAAGCCCTTCAGCCCGCGCGAGCTGGTGGCCCGCACCCGCGCCCTGCTGCGCCGTGTGCAGCGCCTGCAGCCCG
CGCCAACGGCCAGCGCAGCTCCGGCCGATGCCCTGTTCAGCATCGATCCACAGGGCCAGCGCGTGCGCATGCAGGGTGTG
CCCCTGGAGCTGACGCGGCGCGAGTACCAGTTGTTGCGCTGCCTGCTGGAGCGCCCCGGGCGCATCCTCAGCCGCGAGTT
CCTGCTCGACAGCATCTGGGGCCAGGACAGCGACAGCACGGACCGCACCGTGGATACGCACGTCAAGACCCTGCGCGCCA
AGCTGCGCGCCCAGGCGCCGCAGCAGGACTTCATCACCACCCACCGCGGCATGGGCTACAGCCTGACGCTGCCGGGCTGA

Protein sequence : 
MQGLPMTNAPRVLLVEDDPAIARTVCYALERDGIAVRHCLQLADARAQWQAQPPDALLLDVGLPDGNGLDWCRELRQAGA
AVPLLVLSARGEEMDRVLGLELGADDYLTKPFSPRELVARTRALLRRVQRLQPAPTASAAPADALFSIDPQGQRVRMQGV
PLELTRREYQLLRCLLERPGRILSREFLLDSIWGQDSDSTDRTVDTHVKTLRAKLRAQAPQQDFITTHRGMGYSLTLPG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-14 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Daci_5423 YP_001566437.1 two component transcriptional regulator CP001918.1.gene5135. Protein 8e-16 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Daci_5423 YP_001566437.1 two component transcriptional regulator VFG0596 Protein 1e-14 41
Daci_5423 YP_001566437.1 two component transcriptional regulator VFG1389 Protein 1e-18 41