Gene Information

Name : Daci_5400 (Daci_5400)
Accession : YP_001566414.1
Strain : Delftia acidovorans SPH-1
Genome accession: NC_010002
Putative virulence/resistance : Virulence
Product : lipoprotein releasing system ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 5993920 - 5994636 bp
Length : 717 bp
Strand : -
Note : KEGG: ajs:Ajs_3420 lipoprotein releasing system, ATP-binding protein; TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGAATGAAGTGAATGTGATGCCCGGTTTCGAAGTGTCCCAGCAGGGCGCCGTGGTCCTGGATGCGCGCGGCCTGACCAA
GCGCTTTGCCGAAGGACGGCTCAACGTGCAGGTGCTGGCAGGTGTCGACCTGCAGGTGCGTGCGGGCGAGACGCTGGCCA
TTGTCGGCGCCTCGGGCTCGGGCAAGAGCACGCTGCTGCACCTGCTGGGCGGGCTGGACGCCCCCACCAGCGGCAGCGTC
ACCCTCAAGGGCGAGCCCCTGCATGAACTCAGCGCCCAGAAGCAGGGCGCGCTGCGCAACCGGCACCTGGGCTTCATCTA
CCAGTTCCACCATCTGCTGCCCGAATTCAGCGCCCAGGACAACGTGGCCATGCCGCTGCGCATACGCCGCGACGACAGGG
CCGAGTGCATGGAGCGCGCCGCACGCATGCTGGCCGCCGTGGGCCTGGGCGACCGCATGCTGCACCGTCCGGCCGAACTG
TCCGGGGGCGAGCGCCAGCGCGTGGCCATTGCTCGCGCCCTGGTCACCCAGCCGGCCTGCGTGCTGGCCGACGAGCCCAC
CGGCAACCTGGACCGCAGCACGGCCGACACCGTGTTCCGCCTGATGCTGGAGCTGGCGCGCAGCCATGGCACGGCCTTCG
TCATGGTCACCCACGATGAGCAACTGGCGGCGCGCTGCGACCGCATGGTGCGCCTGGTGCAGGGCCAACTGGCCTGA

Protein sequence : 
MNEVNVMPGFEVSQQGAVVLDARGLTKRFAEGRLNVQVLAGVDLQVRAGETLAIVGASGSGKSTLLHLLGGLDAPTSGSV
TLKGEPLHELSAQKQGALRNRHLGFIYQFHHLLPEFSAQDNVAMPLRIRRDDRAECMERAARMLAAVGLGDRMLHRPAEL
SGGERQRVAIARALVTQPACVLADEPTGNLDRSTADTVFRLMLELARSHGTAFVMVTHDEQLAARCDRMVRLVQGQLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-30 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-31 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-31 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-31 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Daci_5400 YP_001566414.1 lipoprotein releasing system ATP-binding protein NC_008702.1.4606598. Protein 2e-32 46
Daci_5400 YP_001566414.1 lipoprotein releasing system ATP-binding protein NC_012469.1.7686878. Protein 7e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Daci_5400 YP_001566414.1 lipoprotein releasing system ATP-binding protein VFG2059 Protein 2e-15 42