Gene Information

Name : Daci_5342 (Daci_5342)
Accession : YP_001566356.1
Strain : Delftia acidovorans SPH-1
Genome accession: NC_010002
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L19
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0335
EC number : -
Position : 5930046 - 5930486 bp
Length : 441 bp
Strand : -
Note : PFAM: ribosomal protein L19; KEGG: ajs:Ajs_3352 ribosomal protein L19

DNA sequence :
ATGGCGCCAATCCCGGCGCTTGCCAATCCTGGCGCGGACAAGATCGATTGGATGTTGACCATGAATCTGATCCAGATCCT
CGAGCAAGAGGAAATCGCCCGTCTGAACAAGACCATCCCCCAGTTCGCCCCCGGTGACACCGTCATCGTGAGCGTGAACG
TGGTCGAAGGCAGCCGCAAGCGCGTGCAGGCTTACGAAGGCGTGGTGATCGCCAAGCGCAACCGTGGCCTGAACAGCGGC
TTCACCGTGCGCAAGATCTCCAGCGGTGAAGGCGTGGAGCGTACGTTCCAGACCTACTCGCCCCTGATCGCCGGCATCGA
AGTCAAGCGTCGCGGTGATGTGCGTCGTGCCAAGCTGTACTACCTGCGCGAGCGCAGCGGCAAGTCGGCCCGCATCAAGG
AAAAGCTGCCGTCGCGTGTCAAGGTTTCTGCCGAAGCCTAA

Protein sequence :
MAPIPALANPGADKIDWMLTMNLIQILEQEEIARLNKTIPQFAPGDTVIVSVNVVEGSRKRVQAYEGVVIAKRNRGLNSG
FTVRKISSGEGVERTFQTYSPLIAGIEVKRRGDVRRAKLYYLRERSGKSARIKEKLPSRVKVSAEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rplS AAS66827.1 50S ribosomal subunit protein Not tested SSR-1 Protein 2e-33 67
rplS CAA68924.1 ribosomal protein L19 Not tested Internalin Protein 7e-26 56