|
Name : Daci_5225 (Daci_5225) Accession : YP_001566239.1 Strain : Delftia acidovorans SPH-1 Genome accession: NC_010002 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 5791454 - 5792887 bp Length : 1434 bp Strand : - Note : KEGG: ajs:Ajs_3212 replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase DNA sequence : ATGTCGTCCGTAATGCCCCCGCTCGATCTCGATGATGCGTTCGCACCGCTGCCTGCTGGCGACCAGCAGGTGGCCCAGTT GCGCGTGCCGCCGCATTCGATGGAGTCCGAGTCCAGCGTTCTAGGGGGGCTGCTGCTGGACAACAACGCCTGGGAGCGTG TTGGTGATCTGCTGGTGGATGGTGATTTCTACCGCCATGAGCACAAGCTGATCTACGAGGCCATCGGCAAGCTGATCAAC GGCAGCAAGCCGGCCGATGTGATCACGGTCTACGAGCATTTGCAGAGCATGGGCAAGGCCGAGGAAATCGGCGGCCTGCT GTACCTGAACCAGCTGGCGCAGTACGTGCCCAGCGCCACTAATATCCGGCGCTATGCGGAGATCGTGCGGGAGCGCTCCA TCCTGCGCAAACTGGTGACCGCCAGCGACGACATCGCCACCAATGCCTTCAATCCGCAGGGCAAGACGGTCGATCGCATT CTGGACGAGGCCGAGCAGAAGATCCTGGCCATCGGCGAGGAGGGTGCGCGCAACAAGCAGGGCTTTCAGTCGCTCGACAC GCTGGTGGTTGACTTGCTGGACCGTGTCCAGGAGATGGCCGACAACCCCATGGACGTGACCGGCGTGCCCACGGGTTTCG TCGATCTGGACCGCATGACCAGCGGCCTGCAGGCTGGTGACCTGGTGGTGCTGGCTGCCCGTCCCTCGATGGGCAAGACC TCGTTTGCGGTGAATATCGCCGAGCATGTGGCGCTCAACGAGGGCCTGCCGGTCGCCATTTTCTCCATGGAAATGGGCGC GGCCCAGCTGGCGGTTCGTATCGTCGGCTCCATCGGCCGCGTCAACCAGGGCAATCTGCGCACGGGCAAGCTCAACGACG ACGAGTGGCCGCGCCTGACGGAAGCCATCGAGCGGCTGCGCACGGTATCCCTGCACATCGATGAGACACCGGGCCTGTCC CCCACGGAGCTGCGCGCCAATGCGCGGCGCCTGGCGCGCACCTGCGGCAAGCTGGGCCTGATCGTGGTGGACTATTTGCA GCTGATGAGCGGCTCGGGCTCGGCTGCCAGTTCCGACAACCGTGCGACCGAGCTGGGCGAGATTTCGCGGGGCCTGAAAA TGCTGGCGAAGGAGCTGCAGTGCCCGGTGATTGCCCTGTCCCAGCTCAACCGCTCGGTGGAGCAGCGCACCGACAAGCGT CCCATGATGTCCGACCTGCGCGAATCGGGCGCCATCGAGCAGGATGCCGACATCATCATGTTCATCTACCGTGATGACTA CTACAACAAGGACAGCAAGGAGCCGAACATTGCCGAAGTCATCATCGGCAAGCAGCGTAACGGTCCCACGGGAACGGTGA AGGTGTTCTTCCAGAAGAACCAGACGCGCTTCGAGAACCTGGCTGTGGGCTACGGTGGCGGCGACGAGTACTGA Protein sequence : MSSVMPPLDLDDAFAPLPAGDQQVAQLRVPPHSMESESSVLGGLLLDNNAWERVGDLLVDGDFYRHEHKLIYEAIGKLIN GSKPADVITVYEHLQSMGKAEEIGGLLYLNQLAQYVPSATNIRRYAEIVRERSILRKLVTASDDIATNAFNPQGKTVDRI LDEAEQKILAIGEEGARNKQGFQSLDTLVVDLLDRVQEMADNPMDVTGVPTGFVDLDRMTSGLQAGDLVVLAARPSMGKT SFAVNIAEHVALNEGLPVAIFSMEMGAAQLAVRIVGSIGRVNQGNLRTGKLNDDEWPRLTEAIERLRTVSLHIDETPGLS PTELRANARRLARTCGKLGLIVVDYLQLMSGSGSAASSDNRATELGEISRGLKMLAKELQCPVIALSQLNRSVEQRTDKR PMMSDLRESGAIEQDADIIMFIYRDDYYNKDSKEPNIAEVIIGKQRNGPTGTVKVFFQKNQTRFENLAVGYGGGDEY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 3e-91 | 50 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 5e-78 | 44 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 5e-78 | 44 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 1e-76 | 44 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 3e-79 | 43 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 2e-79 | 43 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 2e-78 | 42 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 3e-77 | 41 |
