Gene Information

Name : Daci_5220 (Daci_5220)
Accession : YP_001566234.1
Strain : Delftia acidovorans SPH-1
Genome accession: NC_010002
Putative virulence/resistance : Unknown
Product : aminotransferase AlaT
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0436
EC number : -
Position : 5786586 - 5787821 bp
Length : 1236 bp
Strand : -
Note : broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor

DNA sequence :
ATGAAAACCGTTCTCAAATCCGCAAAACTAGCCAACGTCTGTTATGACATCCGCGGGCCCATCATGGACGCGGCGAAGAA
GATGGAAGAGGACGGGCAGAAGATCATCAAGCTCAATATCGGCAACCTGGCCGTGTTCGGCTTCGATGCCCCCGAGGAAG
TGCAGCAGGACATGATCCGCAACCTGCCCAATTCGGCAGGCTACTCGGACAGCAAGGGTATCTTCGCGGCGCGCAAGGCC
GTGATGCATGAGACCCAGCGCCAGGGCATCCTGGGCGTGACGCTGGACGATATCTACCTGGGCAATGGCGCATCCGAGCT
GATCAGCCTGGCCACGAACGCGCTGCTGGACGACGGCGACGAGATGCTGCTGCCAGCGCCCGACTATCCGCTGTGGACCG
CCGTCACCAGCTTGTCGGGCGGCACGCCCGTGCACTACATGTGCGACGAGTCCAACGGCTGGATGCCCGACCTGGAAGAT
ATCCGCGCCAAGATCACGCCGCGCACCAAGGGCATCGTCGTCATCAATCCCAACAACCCCACGGGCGCCCTGTACAGCAA
GCAGCTGCTGCAAAGCATCGTGGCGCTGGCTCGCGAGCATGGCCTGGTGATCTTTGCCGACGAGGTCTATGACAAGGTGC
TGTACGACGACGTGGTGCACACGCCGCTCGCCAGCCTGTCCACCGATGTGCTGACGCTGACCTTCAACTCGCTGTCCAAG
GCCTATCGCAGCTGCGGCTACCGCGCCGGCTGGATGGTGGTCTCGGGCGACAAGAAGGCGGCCCGGGACTATATCGAGGG
CCTGAACATGCTCTCCAACATGCGCCTGTGCGCCAATGTGCCTGGCCAATGGGCCGTGCAGACGGCGCTGGGCGGCCACC
AGAGCATCGACGAGCTGGTGCAGGAGGGCGGCCGGCTGCGCGTGCAGCGCGATCTGGCCCACAAGCTGATCACCGAAATC
CCCGGCGTGAGCTGCGTCAAGCCGCAAGCCGCGCTGTACATGTTCCCGCGCCTGGACCCCGAGATCTACCCGATCAAGGA
TGACCAGGCGTTCTTCCTGGAAGTGCTGCAAGAGACCAAGGTCATGCTGGTGCAGGGAACAGGCTTCAACTGGCCGCACC
CCGACCATTTCCGCATCGTCTTCCTGCCGCACGACACCGACCTGCGCGAGGCCATCCGCCGTCTCGCAGTGTTCCTCGAG
AAATACCGCAAGCGCCACGGCACGGACCGCGGCTGA

Protein sequence :
MKTVLKSAKLANVCYDIRGPIMDAAKKMEEDGQKIIKLNIGNLAVFGFDAPEEVQQDMIRNLPNSAGYSDSKGIFAARKA
VMHETQRQGILGVTLDDIYLGNGASELISLATNALLDDGDEMLLPAPDYPLWTAVTSLSGGTPVHYMCDESNGWMPDLED
IRAKITPRTKGIVVINPNNPTGALYSKQLLQSIVALAREHGLVIFADEVYDKVLYDDVVHTPLASLSTDVLTLTFNSLSK
AYRSCGYRAGWMVVSGDKKAARDYIEGLNMLSNMRLCANVPGQWAVQTALGGHQSIDELVQEGGRLRVQRDLAHKLITEI
PGVSCVKPQAALYMFPRLDPEIYPIKDDQAFFLEVLQETKVMLVQGTGFNWPHPDHFRIVFLPHDTDLREAIRRLAVFLE
KYRKRHGTDRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 2e-116 58
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 2e-116 58
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 2e-116 58
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 2e-116 58