Gene Information

Name : Daci_5207 (Daci_5207)
Accession : YP_001566221.1
Strain : Delftia acidovorans SPH-1
Genome accession: NC_010002
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 5774063 - 5776675 bp
Length : 2613 bp
Strand : -
Note : KEGG: ajs:Ajs_3198 ATPase AAA-2 domain protein; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase

DNA sequence :
ATGCGAATCGACAAACTGACAACCAAGTTCCAGGAAGCCCTGGCCGACGCGCAAACGCTGGCCCTGGGCGGTGACCAATC
CAATATCGAACCCCTGCACCTGCTCGTGGCGCTGCTGCGCCAGGACGATGGTCCGCGCTCGCTCTTGCAGCGCGCCGGCG
CCAACGTGGGCCAGCTGCAGGCCGCGGCCGAGAAGGCCCTGGCAGATCTGCCGCGCGTGCAGCACCAGGACCAGGTGCAG
GTCGGCTCCGAGCTGGGCCGGCTGCTGCAGGCGACCGAGAAGGAAGCCCTCAAGCGCGGCGACCAGTTCATTGCCAGCGA
GCTGTTCCTGCTGGCGCTGACCGACAGCAGCGGCTCCTCCACGCGCGCAGGCCAACTGCTCAAGGAAAGCGGCGTGACGC
GCTCCAGCCTGGAGTCGGCCATCAACGCCGTGCGCGGCGGCCAGACCATGGACAGCGCCGAAGGCGAAGGCCAGCGCGAG
GCCCTCAAGAAATACACCATGGACCTGACCGAGCGCGCGCGCATCGGCAAGCTCGATCCGGTGATCGGGCGTGACGACGA
AATCCGCCGCTCCATCCAGGTGCTGCAGCGCCGCAGCAAGAACAACCCCGTGCTCATCGGCGAGCCCGGCGTGGGCAAGA
CAGCCATTGTCGAGGGCCTGGCCCAGCGCATCGTGGCCGGCGAGGTGCCCGAAAGCCTCAAGAACAAGCGCGTGCTGTCG
CTGGACATGGCAGGCCTGCTGGCCGGCGCCAAATACCGTGGCGACTTCGAGGAACGCCTGAAGTCCGTGCTCAAGGAAGT
GGCCCAGGAAGAGGGCCGCATCATCCTGTTCATCGACGAGATCCACACCATGGTCGGTGCCGGCAAGGCCGACGGCGCCA
TGGATGCGGGCAACATGCTCAAGCCGGCCCTGGCGCGCGGCGAGCTGCACTGCATCGGCGCGACCACGCTCGATGAATAC
CGCAAGTACATCGAAAAGGATGCGGCGCTGGAGCGGCGCTTCCAGAAGGTGCTGGTCGAAGAGCCTTCCGTGGAGGACAC
CATCGCCATCCTGCGCGGACTGCAGGTGCGCTACGAGGCCCACCACGGCGTGGACATCACCGACCCGGCCATCGTGGCTG
CGGCCGAGCTGAGCCACCGCTACATCACCGACCGCTTCCTGCCCGACAAGGCCATCGACCTGATCGACGAGGCGGCGGCC
AAGATCAAGATCGAGATCGACTCCAAGCCCGAGGTCATGGACAAGCTCGAGCGCCGCATGATCCAGCTCAAGATCGAGCG
CGAGGCCATGAAGAAGGAAAAGGACGAGGCCTCGCAAAAGCGCCTGCAACTGATCGAGGAAGAACTCGGCAGCCTGGAGC
GCGAGTACGCCGACCTGGAAGAGGTCTGGAAGAGCGAGAAGGCCAGCGCCCAGGGCTCCGAGCAGATCCGCAAGGAGATC
GACCAGATCCGCATCCAGATCGAGGAGCTCAAGCGCAAGGGCGACTTCAACAAGGTGGCCGAGCTGCAGTACGGCAAGCT
GCCCTCGCTGGAAAAGCAGCTCAACGAAGCCCAGGCCAACGAGCAGGGGCAGGGCGGTGCACCCGCCCACAGGCTGCTGC
GCACCCATGTCGGCGCCGAGGAAATTGCCGAAGTGGTCAGCCGTGCCACGGGCATTCCCGTGGCCAAGATGATGCAGGGC
GAGAAGGACAAGCTGCTGCGCATGGAAGACCGGCTGCATGACCGCGTCGTCGGCCAGGACGAGGCCATCTCGGCCGTGGC
CAATGCCATTCGCCGCTCGCGCTCGGGTCTGTCCGATCCCAACCGGCCCACGGGCTCCTTCCTGTTCCTGGGCCCCACGG
GCGTGGGCAAGACCGAGCTGTGCAAGGCTCTGGCCGGCTTCCTGTTCGACAGCGAGGACCATCTGGTGCGCATCGACATG
AGCGAGTTCATGGAAAAGCATTCCGTGGCCCGCTTGATCGGCGCGCCGCCCGGCTACGTGGGCTACGAGGAAGGCGGTTA
CCTGACCGAGGCCGTGCGCCGCAAGCCCTACAGCGTGCTGCTGCTCGATGAGGTCGAAAAGGCCCATCCCGACGTGTTCA
ACGTGCTGCTGCAGGTGCTGGACGATGGTCGCCTGACCGATGGCCAGGGCCGCACCGTGGACTTCAAGAACACGGTCATC
GTGATGACGAGCAACATAGGCTCTTTGCTGATCCAGGCCATGGTCGGCGAGGATTACGATGATGTGAAAGATGCGGTCTG
GGGGGAACTCAAGAACCATTTCCGACCCGAATTCCTCAACCGCATCGACGAGACCGTGGTCTTCCACGCGCTCGACGCGA
AGAATATCGAGTCGATCGCAAGGATTCAGCTCAAGCTGCTGGAGCGTCGTTTGGAGAAAATGGACCTTGCGCTGCAGGTG
TCCGACCAGGCGCTGGCCGAACTGGCCAAGGTGGGCTTCGATCCCGTTTTCGGGGCCCGGCCGCTCAAGCGCGCGATACA
GCAGCGGATCGAGAATCCGCTGTCGAAACTGCTGCTCGAAGGGCGCTTCCCGCCCAAGAGCACGATTGCGGTACATGTGG
ACCCGGTACTGGAGCCGGGCGTATTCCGGTTCGATGCGGCAGACCCCGCCTGA

Protein sequence :
MRIDKLTTKFQEALADAQTLALGGDQSNIEPLHLLVALLRQDDGPRSLLQRAGANVGQLQAAAEKALADLPRVQHQDQVQ
VGSELGRLLQATEKEALKRGDQFIASELFLLALTDSSGSSTRAGQLLKESGVTRSSLESAINAVRGGQTMDSAEGEGQRE
ALKKYTMDLTERARIGKLDPVIGRDDEIRRSIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVAGEVPESLKNKRVLS
LDMAGLLAGAKYRGDFEERLKSVLKEVAQEEGRIILFIDEIHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEY
RKYIEKDAALERRFQKVLVEEPSVEDTIAILRGLQVRYEAHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAA
KIKIEIDSKPEVMDKLERRMIQLKIEREAMKKEKDEASQKRLQLIEEELGSLEREYADLEEVWKSEKASAQGSEQIRKEI
DQIRIQIEELKRKGDFNKVAELQYGKLPSLEKQLNEAQANEQGQGGAPAHRLLRTHVGAEEIAEVVSRATGIPVAKMMQG
EKDKLLRMEDRLHDRVVGQDEAISAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTELCKALAGFLFDSEDHLVRIDM
SEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVI
VMTSNIGSLLIQAMVGEDYDDVKDAVWGELKNHFRPEFLNRIDETVVFHALDAKNIESIARIQLKLLERRLEKMDLALQV
SDQALAELAKVGFDPVFGARPLKRAIQQRIENPLSKLLLEGRFPPKSTIAVHVDPVLEPGVFRFDAADPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 7e-96 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Daci_5207 YP_001566221.1 ATP-dependent chaperone ClpB VFG2076 Protein 2e-102 44