|
Name : Daci_5052 (Daci_5052) Accession : YP_001566066.1 Strain : Delftia acidovorans SPH-1 Genome accession: NC_010002 Putative virulence/resistance : Virulence Product : TonB-dependent receptor Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG4771 EC number : - Position : 5597597 - 5599777 bp Length : 2181 bp Strand : - Note : PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: psa:PST_1001 putative outer membrane receptor DNA sequence : ATGTCGTATCGCGATCTGCGCGGAGTTCTTCCGTCGCGTCCTTCCCATCTGGCCCTTGTGGTGGCTGCCGTCTGCGCTTC GGGTGCCGTCTGTGCACAGACGGCAACAGGCAATGCCGTGCCCGCCACGGAGCTGCGCGAAGTCGTGGTCTCCGCCTCGG GTTTCGAGCAGGACATCAAGGAGGCGCCGGCCTCCATCACCGTCATACCGCGTGAGGAACTGGCCAAGGGCCGCTTCGGC AGCCTGACCGACGCGCTGGAAAGCGTGGAAGGCATCGACGTGGGCGCCCCCGCAGGCAAGACCGGCGGCCTGAACATCAG CATCCGCGGCATGCCCAGCGACTACACGCTGGTGCTCATCGACGGCCGCCGCCAGAACTCGGCCGGCAACGTCACGCCCA ACGGCTTTGGCGAGACGCAGACCAGCTTCATGCCGCCCATCGGCGCCATCGAGCGCATCGAGGTCATCCGCGGCCCCATG TCCACGCTCTACGGCTCCGACGCCATGGGCGGCGTGATCAACATCATCACCCGCAAGGTCGGCAAGACCTGGACGGGCAG CGTCAGCGCCGACTACACGCTGCAGGAAGAGTCGGAGTTCGGCGACATCAAATCCGGCAAGTTCTACCTGAGCGGCCCCA TCAAGGAGGACCTGCTGGGCCTGTCGATCCGCGGCAGCACGCAGCGCCGGGCCGCTTCGGACATCACCTATGCGGGCGCC AACGGCCAGCCCGCCGTGGCCATCATGGGCGCCAATCCGGTCAAGTCCGAGATCAACAACCTGGGCCTTCGCCTGGCGCT CACGCCCAACAGGTACCACGACATCACGCTGGACCTGGACTCGGGCCGCCAGACCTATGACAACTCGCGCGGCCAGCTCG GCACGCTGGGGCTGCAGGGCGGCTACGGCCCCGAACAGAAATACAACCGCGACCAGCTCACGCTGGCGCACACGGGCCGC TTCGGCTTCGGAACCTGGGACACCAGCTTCATGGTCAACCGCACCGAAACCATGGGCCGCACCATTCCCCCGGGAACGCC GGGCGCGACACCGGGCGCTGCGCGCACGCTGGAGGTGGAAAGCAAGGTGCTGGACAGCAAGCTGGTCCTGCCCTGGGGCG CCCACCTGACCACGCTGGGCGGCCAGTGGTGGGATGCCGAGATGAAGGACGGCGTGGCGCCGAACAAGTTCGCCTTCACG CAGAAGGCCCTGTTTGCCGAGGACGAATGGAGCCTGACCGACGCCTTCAAGCTCACGCTGGGCGCGCGCTATGACCGCCA CAGCCTCTTCGGCGGCAAGCTCAGCCCGCGCATCTACGGCGTGTGGAATGCCGCGCCGCAGTGGACCGTGAAGGGCGGCA TCAGCAACGGCTACAAGACGCCGCGCGTGGAACAGCTGGCGCCCGGTATCAACGGCTTTGGCCAGCAGGGCCGCCTGCCG CTGGTGGGCAGCCCCAACCTCAAACCCGAAACCAGCCGCACCACCGAACTGGGCGTCTATTTCGACAGCCCCACGGGCTT TGCAGGCAGCGCCACGGTGTTCAACAACGAGTTCAAGGACAAGATCACCAGCGGCCCGGGCCTGATCAACTGCGACTTCG CGGCAGCGCCCAACCGGCCCGGCTGCGTGAGCTTCGGCAACTGGCCCCTGGTGGATGCCTTCGGCCAGTCCATCAACGTG GACGAGGCCGTCACGCGCGGGCTGGAGCTGAGCGCGCGCATGCCGCTGGGGCGCGGCTGGAATGCCAGCGCGAACTACAC CTTCACCAAGAGCGAGCAAAAGAGCGGCCCCAACCGGGGCAACCCGCTGAGCGACACGCCCAAGCATGCGCTCAACGCCC GCCTGAACTGGGAGCCGGGTGCCCAGTGGAACCTGTGGCTGCGTGCCGAATACCGCAGCGAACGCTTCCGCGACCCCGGC ACCAGCGCCAGCACCCAGGCCGCCAAGGCCGCGCTGGGCAACTACAAGCCCTACACGCAGTTCCACCTGGGTGGCAGCTA CCGCGTGAGCAAGCAGTTCACCATCAACGCGGCCATCTACAACCTGTTCAACAAGGGTTTCGTGGACTACCAGCCCTACA ACGTACCGGGCCAGGTCCAGGGAGCCCTGCTGTTTGGCAACCGCTACGCGAACAGCCAGGAAGGCCGCCGCCTGTGGGTG TCCGCCAACTACGAGTTCTGA Protein sequence : MSYRDLRGVLPSRPSHLALVVAAVCASGAVCAQTATGNAVPATELREVVVSASGFEQDIKEAPASITVIPREELAKGRFG SLTDALESVEGIDVGAPAGKTGGLNISIRGMPSDYTLVLIDGRRQNSAGNVTPNGFGETQTSFMPPIGAIERIEVIRGPM STLYGSDAMGGVINIITRKVGKTWTGSVSADYTLQEESEFGDIKSGKFYLSGPIKEDLLGLSIRGSTQRRAASDITYAGA NGQPAVAIMGANPVKSEINNLGLRLALTPNRYHDITLDLDSGRQTYDNSRGQLGTLGLQGGYGPEQKYNRDQLTLAHTGR FGFGTWDTSFMVNRTETMGRTIPPGTPGATPGAARTLEVESKVLDSKLVLPWGAHLTTLGGQWWDAEMKDGVAPNKFAFT QKALFAEDEWSLTDAFKLTLGARYDRHSLFGGKLSPRIYGVWNAAPQWTVKGGISNGYKTPRVEQLAPGINGFGQQGRLP LVGSPNLKPETSRTTELGVYFDSPTGFAGSATVFNNEFKDKITSGPGLINCDFAAAPNRPGCVSFGNWPLVDAFGQSINV DEAVTRGLELSARMPLGRGWNASANYTFTKSEQKSGPNRGNPLSDTPKHALNARLNWEPGAQWNLWLRAEYRSERFRDPG TSASTQAAKAALGNYKPYTQFHLGGSYRVSKQFTINAAIYNLFNKGFVDYQPYNVPGQVQGALLFGNRYANSQEGRRLWV SANYEF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| r4 | AAC61730.1 | exogenous ferric siderophore receptor R4 | Not tested | PAI I CFT073 | Protein | 3e-98 | 41 |
| c3610 | NP_755485.1 | bifunctional enterobactin receptor/adhesin protein | Not tested | PAI I CFT073 | Protein | 4e-98 | 41 |
| ECUMN_3356 | YP_002414032.1 | bifunctional enterobactin receptor/adhesin protein | Virulence | Not named | Protein | 4e-98 | 41 |
| iha | AAF36432.2 | adhesin | Virulence | TAI | Protein | 3e-98 | 41 |
| Z1178 | NP_286713.1 | bifunctional enterobactin receptor/adhesin protein | Virulence | TAI | Protein | 4e-98 | 41 |
| Z1617 | NP_287121.1 | bifunctional enterobactin receptor/adhesin protein | Not tested | TAI | Protein | 4e-98 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Daci_5052 | YP_001566066.1 | TonB-dependent receptor | VFG1731 | Protein | 2e-98 | 41 |
