|
Name : Daci_5002 (Daci_5002) Accession : YP_001566016.1 Strain : Delftia acidovorans SPH-1 Genome accession: NC_010002 Putative virulence/resistance : Virulence Product : type I glutamine synthetase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0174 EC number : - Position : 5537637 - 5539052 bp Length : 1416 bp Strand : - Note : TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: aav:Aave_1442 glutamine synthetase, type I DNA sequence : ATGGCAAAGACCGTTGCAGACGTGTTGAACATGGTGAAGGAGAACGAGGTCAAATTCGTGGACCTTCGTTTTACGGACAC CCGTGGCAAGGAGCAGCACGTCACGGTGCCGGTGTCGCACTTCGACGAAGACAAGTTCACCTCGGGCCACGCCTTCGACG GCTCGTCGGTGGCAGGCTGGAAGGGCATTGAAGCATCTGACATGCAGCTGATGCCCGATCCCGCTACCGCGAACATCGAC CCCTTCTTTGAAGAGACCACGCTGTTCCTGCAGTGCGATGTGATCGAACCCGGTGATGGCAAGGCCTACGACCGCGATCC CCGCTCCGTGGCCAAGCGCGCCGAAGCCTATCTGAAGGCATCGGGCCTGGGCGACACCGCCTACTTCGGACCCGAACCCG AATTCTTCATCTTCGACGGCGTGCGCTGGAACACCGAACCCGGCAGCACCTTCTACGAAATCGAAGAGTACGAAGCACCC TGGAATTCGGGCGCCAAGTTCGAATCCGGCAACCGCGGCCACCGTCCGCGCAACAAGGGCGGCTACTTCCCCGTGCCCCC CGTGGACAGCACCCAGGATCTGCGCGCCGAAATGGTGCTGCTGCTCGAGCAACTGGGCATTCCCGTCGAAGTGTTCCACC ACGAAGTGGCAGGCGCCGGCCAGAACGAGATCGGCACCCGCTTCAGCACCCTGGTGGAGCGTGCCGACTGGACACAGGTC ATGAAGTACGTGATCTGGAACGTGGCCAACACCTACGGCAAGACCGCCACCTTCATGCCCAAGCCCTATCCGGGCGACAA CGGCTCGGGCATGCACGTGCACCAGTCCGTCTGGAAGGATGGCAAGAACCTGTTCGCAGGTGACGGCTACGCCGGCCTGT CCGACTTCGCGCTGTACTACATCGGCGGCATCATCAAGCACGCCCGTGCCCTGAACGCCATCACCAACCCCGGCACCAAC AGCTACAAGCGCCTGGTGCCCGGCTTCGAGGCTCCGGTCAAGCTGGCCTACTCGGCCAAGAACCGCTCGGCATCGATCCG CATCCCCTACGTGGCCAACCCCAAGGGCCGCCGCGTCGAGGCACGCTTCCCCGATCCGCTGATGAACCCCTACCTGGGCT TCTCGGCCCTGCTGATGGCAGGTCTGGACGGCGTGGAAAACAAGATCCATCCCGGCGAAGCCGCGACCAAGGATCTGTAC CACCTGCCCCCGGAAGAGGACAAGCTGGTGCCCACGGTCTGCCACAGCCTGGACCAGGCCCTGGAAGCGCTGGACGCGGA CCGCTCGTTCCTGACCAAGGGCGGCGTGTTCTCGGACAGCATGCTCGATGCCTACATCGAGCTGAAGATGGGCGAAGTGA CCCGTTACCGTCAGGCCGTGCATCCGGTCGAGTACGACATGTACTTCTCGCTGTAA Protein sequence : MAKTVADVLNMVKENEVKFVDLRFTDTRGKEQHVTVPVSHFDEDKFTSGHAFDGSSVAGWKGIEASDMQLMPDPATANID PFFEETTLFLQCDVIEPGDGKAYDRDPRSVAKRAEAYLKASGLGDTAYFGPEPEFFIFDGVRWNTEPGSTFYEIEEYEAP WNSGAKFESGNRGHRPRNKGGYFPVPPVDSTQDLRAEMVLLLEQLGIPVEVFHHEVAGAGQNEIGTRFSTLVERADWTQV MKYVIWNVANTYGKTATFMPKPYPGDNGSGMHVHQSVWKDGKNLFAGDGYAGLSDFALYYIGGIIKHARALNAITNPGTN SYKRLVPGFEAPVKLAYSAKNRSASIRIPYVANPKGRRVEARFPDPLMNPYLGFSALLMAGLDGVENKIHPGEAATKDLY HLPPEEDKLVPTVCHSLDQALEALDADRSFLTKGGVFSDSMLDAYIELKMGEVTRYRQAVHPVEYDMYFSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glnA | YP_003728749.1 | glutamine synthetase | Not tested | cag PAI | Protein | 5e-102 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Daci_5002 | YP_001566016.1 | type I glutamine synthetase | VFG1399 | Protein | 2e-103 | 50 |
