Gene Information

Name : Daci_0483 (Daci_0483)
Accession : YP_001561514.1
Strain : Delftia acidovorans SPH-1
Genome accession: NC_010002
Putative virulence/resistance : Resistance
Product : putative mercuric reductase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1249
EC number : -
Position : 516588 - 518276 bp
Length : 1689 bp
Strand : -
Note : TIGRFAM: mercuric reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; Heavy metal transport/detoxification protein; KEGG: ajs:Ajs_12

DNA sequence :
ATGGCCGAAGCGATCGCCTTGCACATCGACGGCATGACCTGCGCGTCGTGCGCCGAGCACGTCAGAGAGGCGCTGGAGAA
GGTGCCCGGGGTGCGCTCGGCCTCGGTGTCCTATCCGCGGCGACGGGCCGAGGTCGAGGCGGATGCGGACATGAACCATG
GTCCGCTGGTCGCGGCGATGGCCGCGCTCGGTTACCGCGCACGGGTGTCCGACACGCCGAACAAGGCTGCGGGCTTGTTG
GGCAAGGCGCTGGGCTGGCTGGGCAGCGAACCGAGTCACGGTGGTGGCGAGCGGGCGCTGCATGTGGCCGTGATCGGCAG
TGGCGGCGCGGCGATGGCGGCGGCACTCAAGGCGGTCGAGCGAGGCGCGCGCGTGACGCTAATCGAGCGGAGCACCATCG
GCGGCACCTGCGTCAATGTCGGCTGCGTGCCGTCCAAAATCATGATCCGCGCCGCGCACATTGCGCATCTGCGCCGGGAA
AGCCCGTTCGATGCCGGCCTGCCGCCCACGCCGCCGTCCATTCTGCGCGAGCGGCTGCTGGCCCAGCAACAAGGCCGCGT
CGATGCGCTGCGCCATGCCAAGTACGAAGGCATCCTGCAGAGCACCCCGGCTATCACCGTGCTGCATGGCGAGGCCCGTT
TCATGAATGAAAACTGCCTGACCGTGCAACTGGCGGAAGGCGGTGAGCGCACGGTGGCCTTCGACCGCTGTCTCATCGCC
ACTGGTGCGAGCCCCGCGCTCCCGCCGATTCCTGGCTTGAAGGGCACTCCCTACTGGACCTCCACCGAGGCGCTGGCGAG
CGATGCCATTCCCTCGCGGCTGGCCGTGATCGGTTCGTCGGTGGTGGCAGTCGAATTGGCGCAAGCCTTTGCCCGGCTGG
GCAGCCAGGTCACGATCCTCGCGCGCAGCACACTGCTCTTTCGCGAAGACCCCGCCGTCGCCGAAGCCGTCACGGCCGCG
TTCCGTGCCGAGGGCATCGAGGTGCTGGAGCATGTCCAGGCCAGTCGAGTCGCCCATGCAGAGGAAGAGTTCATCTTGAC
GACGGATCGCGGCGAGCTGCGCGCCGACAAGCTGCTCATTGCCACGGGGCGCGCGCCGAACACCCGCACGCTGAACCTCG
AAGCGGCGGGCATCGAGGTCAATCCCCAGGGGGCCATCCTCGTCAGCCACACCATGCGTACCAGCGCGCCGCACATCTAC
GCGGCCGGCGACTGCACCGACCAGCCGCAATTCGTCTACGTCGCGGCGGCGGCCGGCACGCGCGCCGCCATCAACATGAC
CGGCGGCGACGCGACGCTGGACCTGACGGCGATGCCGGCCGTGGTGTTCACCGATCCGCAGGTGGCGACGGTGGGCTACA
GCGAGGCGCAAGCGCGCCACGACGGCGTCGAGACCGACAGCCGCACGCTCACGCTCGACAACGTGCCGAGGGCGCTGGCC
AACTTCGACACGCGCGGCTTCATCAAGCTGGTTGCCGAGGCCGGCACCGGACGGCTGATCGGCGTGCAGGCGGTCGCGCC
GGAAGCGGGCGAACTGATCCAGACGGCGGCGCTGGCGATCCGCAACCGGATGACCGTGCAGGAGCTGGCCGATCAGCTAT
TCCCCTACCTGACGATGGTCGAGGGCCTGAAGCTCGCGGCGCAGACCTTCAGCAAGGACGTGAAGCAGCTGTCCTGCTGT
GCCGGATAG

Protein sequence :
MAEAIALHIDGMTCASCAEHVREALEKVPGVRSASVSYPRRRAEVEADADMNHGPLVAAMAALGYRARVSDTPNKAAGLL
GKALGWLGSEPSHGGGERALHVAVIGSGGAAMAAALKAVERGARVTLIERSTIGGTCVNVGCVPSKIMIRAAHIAHLRRE
SPFDAGLPPTPPSILRERLLAQQQGRVDALRHAKYEGILQSTPAITVLHGEARFMNENCLTVQLAEGGERTVAFDRCLIA
TGASPALPPIPGLKGTPYWTSTEALASDAIPSRLAVIGSSVVAVELAQAFARLGSQVTILARSTLLFREDPAVAEAVTAA
FRAEGIEVLEHVQASRVAHAEEEFILTTDRGELRADKLLIATGRAPNTRTLNLEAAGIEVNPQGAILVSHTMRTSAPHIY
AAGDCTDQPQFVYVAAAAGTRAAINMTGGDATLDLTAMPAVVFTDPQVATVGYSEAQARHDGVETDSRTLTLDNVPRALA
NFDTRGFIKLVAEAGTGRLIGVQAVAPEAGELIQTAALAIRNRMTVQELADQLFPYLTMVEGLKLAAQTFSKDVKQLSCC
AG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
merA AAN62178.1 mercuric (Hg(II)) reductase Not tested PAGI-2(C) Protein 0.0 84
merA CAJ77060.1 Mercuric ion reductase Not tested AbaR1 Protein 0.0 80
merA ACN81005.1 MerA Hg(II) mercuric ion reductase Not tested AbaR5 Protein 0.0 78
merA ABQ57371.1 MerA Not tested SGI1 Protein 0.0 77
merA AGK07021.1 MerA Not tested SGI1 Protein 0.0 77
merA AGK07079.1 MerA Not tested SGI1 Protein 0.0 77
merA AFG30120.1 MerA Not tested PAGI-2 Protein 0.0 76
merA YP_006098387.1 mercuric ion reductase Not tested Tn2411 Protein 0.0 76
merA AET25397.1 MerA Not tested PAGI-2(C) Protein 0.0 76
unnamed ABR13401.1 mercuric reductase Not tested PAGI-5 Protein 0.0 75
SE0085 NP_763640.1 dihydrolipoamide dehydrogenase Not tested SCCpbp4 Protein 1e-84 41
merA BAB47642.1 mercuric reductase Not tested Type-III SCCmec Protein 8e-85 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Daci_0483 YP_001561514.1 putative mercuric reductase BAC0653 Protein 0.0 80
Daci_0483 YP_001561514.1 putative mercuric reductase BAC0652 Protein 0.0 78
Daci_0483 YP_001561514.1 putative mercuric reductase BAC0650 Protein 1e-166 68
Daci_0483 YP_001561514.1 putative mercuric reductase BAC0651 Protein 5e-85 41
Daci_0483 YP_001561514.1 putative mercuric reductase BAC0224 Protein 6e-83 41