Gene Information

Name : Daci_0478 (Daci_0478)
Accession : YP_001561509.1
Strain : Delftia acidovorans SPH-1
Genome accession: NC_010002
Putative virulence/resistance : Resistance
Product : MerR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 509410 - 509850 bp
Length : 441 bp
Strand : -
Note : TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: vei:Veis_2831 putative transcriptional regulator, MerR family

DNA sequence : 
ATGCATGTCCTGACAACATGTGAGTGTTCTGCGATGAAAATTGGCGAGTTGAGCCACGCCACCGGCGTGGACACCGACAC
GATCCGGTTCTACGAGAGGACGGGGGTGTTGCCGCCGCCAGCTCGGCAGACCAATGGATACCGGGTATACGGGACGGAAC
ACATCGATGGACTGTCCTTTGTCCGCCACTGCCGGGCCTTGGACATTCCTCTGGCCGATGTCAGGCGGCTCCTGAACTTC
ACATCCCGTCCGGATGAGGATTGCGCGGACATCAACCGGCTGGTCGACGAGCAGATTGCGAGGGTGCGTGCCCGCCTGAC
CAGCTTGAAAGCACTGGAAAGGCAACTGACGACGCTGCGCGCCCGCTGCTCCGCAGGACATCAAGCGAAAGAGTGCGGCA
TCCTTGGCGAGCTGGTCTCTGCAGCGCAGCGGGAAGCGTAG

Protein sequence : 
MHVLTTCECSAMKIGELSHATGVDTDTIRFYERTGVLPPPARQTNGYRVYGTEHIDGLSFVRHCRALDIPLADVRRLLNF
TSRPDEDCADINRLVDEQIARVRARLTSLKALERQLTTLRARCSAGHQAKECGILGELVSAAQREA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 4e-37 48
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 3e-37 48
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 2e-36 47
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 2e-37 47
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 8e-37 46
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 6e-37 46
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 6e-37 46
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 2e-30 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Daci_0478 YP_001561509.1 MerR family transcriptional regulator BAC0058 Protein 2e-31 47
Daci_0478 YP_001561509.1 MerR family transcriptional regulator BAC0301 Protein 6e-26 42