Gene Information

Name : Daci_4246 (Daci_4246)
Accession : YP_001565262.1
Strain : Delftia acidovorans SPH-1
Genome accession: NC_010002
Putative virulence/resistance : Virulence
Product : molydopterin dinucleotide-binding region
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0243
EC number : -
Position : 4644222 - 4647422 bp
Length : 3201 bp
Strand : +
Note : PFAM: molydopterin dinucleotide-binding region; KEGG: ajs:Ajs_2424 molydopterin dinucleotide-binding region

DNA sequence :
ATGACCGACAAGAAGAAACTCCCCCAAGCTCCCGAAGATTCCCTGGATGCCGAGGCCGCCCGCCGCCGCCTGCTGCTGCG
CGGCGGACTCACCGCCGGTGGGCTGGCCGCCTTCGCGGCCGGCTACGGGGAAACACTGGCGCGCGGTGCCAAGGGCCTGG
TCGCAGGCACCTCGGGCACGCCCACGGCCAGCGCCACGCGCGGCAATTCGCTGACGCCCGAGTTCCGCATCGACCCGGCC
ACGGGCGCGCTCGCCACCCAGCCCGGCCAGGTGGTCAGCCCCTCCAGCTGCCTGGGCTGCTGGACGCAGTGCGGCGTGCG
CGTGCGTGTCGATACCGCCAGCAACCGCATCCTGCGCGTGGCAGGCAACCCCTACCACCCGCTGGCCACCACGCGCCCTG
CCGCCATGGAAGAACCCGTGCGCGAGGTCTACGCCAAACTGGGCAAGGAGCTGGGCCTGGAGGGCCGGGCCACGTCCTGC
GCGCGCGGCTCGTCCATGCTGGAGCACCAAAGTGCGCCGCACCGCGTGCTCACCCCGCTCAAGCGCGTGGGCCCGCGCGG
CAGCGGTCGCTGGCAGAGCATTTCCTTCGAGCAGCTGGTGCAGGAAGTCTGCGATGGCGGCGATCTGTTCGGCGAAGGCC
AGGTCGAGGGCCTGCGCGCCATCTGGGACACCAAGACGCCGCTGGACGCCGACAACCCCGAGTTCGGTCCGCGCTCCAAC
CAGTTGCTGGTGACCGACGCCTCCAACGAAGGCCGCGCCCAGCTGCTGCGCCGCTTTGCAGGGCCGTCCTTCGGCACCGT
GAACGTCAGCAACCACGGCGCCTACTGCGGCCAGAGCTTTCGCGTGGGCGCGGCAGCGGCCCTGGGCGACCTGCCCGGCA
TGCCGCACGGCAAGCCCGACTGGAGCCATGCCAGCTTCGGCCTGTTCATCGGCGCGGCACCCGCGCAGTCCGGCAACCCC
TTCCAGCGCCAGGGCCGCGAACTGGCCGAGGCCCGCTCGCGCGAGGACAACCGTTTCCGCTACGTGGTGGTCTCGCCCGT
GCTGCCGACCTCGTCCAGCCTGGCTGCCGGCAGCGGCAACCGCTGGCTGGCCGTCAAGCCGGCCAGCGACCTGGCTCTGG
CCATGGCGCTGATCCGCGTCATCCTGGACGAGGCACGCCATGACACGGGCTTTCTCGCCCAGCCCGGCCCGGCCGCCATG
CAGGCGGCGGGCGAGGCGTCCTGGAGCAATGCCACGCACCTGCTGGTCAACGAGCCCGGCCACCCGCGCCATGGCAGCTT
TCTGCGTGGCGCCGACCTGGGCTGGGCCCTGCCCGCGCCAGCCGAAGACGGCAAGCCGTCCCAGGATGTGTTCGTGGTGC
AGCGTGCCGATGGCAGCCTGGCGCCGCACACCCAGGCCGAGCCTGCACAGCTGATGGTGCGCACCCGCGTGGCGGTGCCC
GGCCTGAAGGCCGAAGGCGCGGACCAGGCCCCCGAGCTGTCGGTCTGCTCCTCGCTGGCCAAGCTGCATGAGCAGGCCAG
CCTCAAGACACTGGACGAGTACGCGGCGCTGTGCGGCGTGGCGCGCGGCGAGATCGAGGCGCTGGCGCGCGAGTTCACCA
GCCATGGCAAGCGCGCCGTAGCCGATGCGCATGGCGGCACCATGAGCGGCGCGGGCTTCTACACCGCCTACGCCATCAGC
ATGCTCAACACCCTGGTGGGCAACCTCAACGTGCAGGGCGGCCTGGTGCTGGATGCCGGCCCGTTCGGCCCCTTCGGCCC
GGGCCCGCGCTACGACTTCGCCAACTTCGACGGCAAGGTCAAGCCGCGCGGCCTGGCGCTGTCACGCCACCGCCAGCCCT
ACGAGAAAAGCGCGGAATTCCAGCGCAAGCGCGAGGGCCAGCCCGAGGGCGCGAAGGACTACCCCGCCGCCCAGGCCCCG
TGGTACCCGGCCGTGGGCGGCCTGTCCAGCGAGATGCTGGCCAGCGCGCTGGCCGGCTACCCCTACCGCGCCAAGGCCTG
GATCAACCACATGAGCAACCCCGTCTACGGCATTGCGGGCTTTCGCAACGCGCTGGTGGACGATCTCAAGGACCCGAAGA
AGCTGCCCCTGATCGTCTCCATCGACCCCTTCATCAACGAGACCAGCGCGCTGGCCGATTTCATCGTGCCCGATACCGTG
ACCTACGAGAGCTGGGGCATCTCGGCGCCCTGGGCCGACGTGGTGGCCAAAAGCTCCACCGTGCGCTGGCCCGTGGTGCA
GCCCGCCGTGGCGCGCACGGCCGGCGGCCAGCCCGTGAACGTGGAGAGCTTCCTCTTCGCCGTGGCAGAACGGCTGGGCC
TGCCCGGCTTTGGCGAGGCCGCCATCAAAGACGCCCAGGGCCAGCCCCATGCGCTGCGCTCGGCCGAGGACTTCTTCATC
CATGCACTGGCCAACGTGGCCTGGGCAGGCGGCAAGCCCGTGCCGGCGGCCAGCGATGACGACATCGCCATCACCGGCGT
GGACAGGCTGGTGCCCGCGCTGCGCCAGCGCCTGAAGGACGATGAATGGCGCCAGGTGGCCATGCTGCTGACGCGCGGCG
GGCGCTTCGACCGCATCGAGGACGCCTGGAAGGACGGCCACACCCGCAAGGCCCACGCGCCTGCCCTGCAGGTCTGGAGC
GAGGAGCTGGCCCGCATGCGCCACGCCATGACGGGCGAGCGCTACAGCGGCTGCCCCACCTGGTATCCGGCGCGGCTGGC
CGACGGCAGCGCCATGCGCACGCATTTCGGCGAGCAGCAATGGCCGCTGCTGCTGACCTCGTACAAGTCCAACCTGATGA
GTTCCATGTCGATTGCCGTCTCGCGGCTGCGCCAGGTGCATCCGCACAACCCGGTGTCCCTGCACCGCGATGACGCCGAG
CGGCTGGGCATCGCCAACGGCGACACGGTGCGCATCCGCACGCCGGGCGGCGCGGTGACGGCCGTGGCCATGGTGCGCGA
CGGCGTGATGCCGGGCACCGTGGCCATCGAGCACGGCTACGGCCACCGCGAGCTGGGCGCGGGCCGCCACAGCATCGACG
GCCAGCCCATGCCGGTGAACGCCGAGCATGCCAATGGCGTGAACCTCAACGACCTGGGCTTTGCCGATCCCACGCGGCCC
GGCTGCAAAAACGTGTGGGTGGACTGGGTGTCCGGCGCCACGGTGCGCCAGGGCCTGCCTGCGCGCATCGAGAAGGTCTG
A

Protein sequence :
MTDKKKLPQAPEDSLDAEAARRRLLLRGGLTAGGLAAFAAGYGETLARGAKGLVAGTSGTPTASATRGNSLTPEFRIDPA
TGALATQPGQVVSPSSCLGCWTQCGVRVRVDTASNRILRVAGNPYHPLATTRPAAMEEPVREVYAKLGKELGLEGRATSC
ARGSSMLEHQSAPHRVLTPLKRVGPRGSGRWQSISFEQLVQEVCDGGDLFGEGQVEGLRAIWDTKTPLDADNPEFGPRSN
QLLVTDASNEGRAQLLRRFAGPSFGTVNVSNHGAYCGQSFRVGAAAALGDLPGMPHGKPDWSHASFGLFIGAAPAQSGNP
FQRQGRELAEARSREDNRFRYVVVSPVLPTSSSLAAGSGNRWLAVKPASDLALAMALIRVILDEARHDTGFLAQPGPAAM
QAAGEASWSNATHLLVNEPGHPRHGSFLRGADLGWALPAPAEDGKPSQDVFVVQRADGSLAPHTQAEPAQLMVRTRVAVP
GLKAEGADQAPELSVCSSLAKLHEQASLKTLDEYAALCGVARGEIEALAREFTSHGKRAVADAHGGTMSGAGFYTAYAIS
MLNTLVGNLNVQGGLVLDAGPFGPFGPGPRYDFANFDGKVKPRGLALSRHRQPYEKSAEFQRKREGQPEGAKDYPAAQAP
WYPAVGGLSSEMLASALAGYPYRAKAWINHMSNPVYGIAGFRNALVDDLKDPKKLPLIVSIDPFINETSALADFIVPDTV
TYESWGISAPWADVVAKSSTVRWPVVQPAVARTAGGQPVNVESFLFAVAERLGLPGFGEAAIKDAQGQPHALRSAEDFFI
HALANVAWAGGKPVPAASDDDIAITGVDRLVPALRQRLKDDEWRQVAMLLTRGGRFDRIEDAWKDGHTRKAHAPALQVWS
EELARMRHAMTGERYSGCPTWYPARLADGSAMRTHFGEQQWPLLLTSYKSNLMSSMSIAVSRLRQVHPHNPVSLHRDDAE
RLGIANGDTVRIRTPGGAVTAVAMVRDGVMPGTVAIEHGYGHRELGAGRHSIDGQPMPVNAEHANGVNLNDLGFADPTRP
GCKNVWVDWVSGATVRQGLPARIEKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrA NP_460348.1 tetrathionate reductase complex subunit A Virulence SPI-2 Protein 0.0 51
ttrA CAB37416.1 tetrathionate reductase subunit A (TtrA) Virulence SPI-2 Protein 0.0 51
ttrA NP_456144.1 tetrathionate reductase subunit A Virulence SPI-2 Protein 0.0 50
ttrA NP_805054.1 tetrathionate reductase subunit A Virulence SPI-2 Protein 0.0 50
ttrA YP_216391.1 tetrathionate reductase complex subunit A Virulence SPI-2 Protein 0.0 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Daci_4246 YP_001565262.1 molydopterin dinucleotide-binding region VFG0484 Protein 0.0 51