Gene Information

Name : Daci_4209 (Daci_4209)
Accession : YP_001565225.1
Strain : Delftia acidovorans SPH-1
Genome accession: NC_010002
Putative virulence/resistance : Unknown
Product : LysR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 4612783 - 4613673 bp
Length : 891 bp
Strand : +
Note : PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pla:Plav_3462 transcriptional regulator, LysR family

DNA sequence :
ATGGAACTGCGACACCTTCGCTGCTTTGTGGCTCTCGCAGAAGAGCTGCACTTCACACGGGCCGCAGAGCGCCTGCATAT
CGAACAGCCACCCTTGTCCCGCGCCATCAAAGAGCTTGAGGATGATCTGGGTGTGGTGCTCTTCGAGCGCAACCGCCGAG
GCACGGTACTGACCGAGGCGGGAGCAACGTTCCTGCAAGATGTGCGCAGAGTGTTCGCCGTCCTCAAACAGGCTCAGGAG
AACGTACAGGCGGTCGCTGCGGGCCTGAGCGGAAGCCTTCGCATTGCCGTATCCGACGGTGCAATCGATCCCAGGCTGTC
GGCCCTCCTGGCCCGCTGCCGCGAGGAAGAGCCGGAGATCGAGATTCGCCTGTCGGAAGTGCCGTTAGCCGATCAGTTGC
GTGGTTTGCGCTCAGGCGACTTCTCGATCGGGTTTGCGCACACGGCGGAGGTCGGCGACGGCATCGTTACCGAGCCACTC
TGGCACGATCCGCTGGTGGTTGCCGTGCCCGCCCGGCATCCTTTGCTTTCACACAAGGCTGTTCCGCTGCATCAGCTTGC
GATCTACCCACTGGTCTTATGCGATCCGCAGGTATGCGAAGGCTACTATCGTGAACTGGCGCGGCTGCTGCGGCCTTTGG
AGCGTCCACCCGACGTCGCCGAGCACGTGTCGTCATTGGACATGATGCTCACCCTGGTCGGTGCCGGCTACGGGGTAGGC
TTCATCACCGAAACCAGGATCGCGGCGAGCCTGCGCCCCGACGTGGTGATCCGCCCTCTGGCCATGGATTCCGCAGTCAT
CACGACCTACTTGCTACGGCCCGCCGGCGAGGACTCGCCGGTGTCGGTGGAGCGATTCATCGCGCGCCTGCGCGAGCACT
CGGGCGATTGA

Protein sequence :
MELRHLRCFVALAEELHFTRAAERLHIEQPPLSRAIKELEDDLGVVLFERNRRGTVLTEAGATFLQDVRRVFAVLKQAQE
NVQAVAAGLSGSLRIAVSDGAIDPRLSALLARCREEEPEIEIRLSEVPLADQLRGLRSGDFSIGFAHTAEVGDGIVTEPL
WHDPLVVAVPARHPLLSHKAVPLHQLAIYPLVLCDPQVCEGYYRELARLLRPLERPPDVAEHVSSLDMMLTLVGAGYGVG
FITETRIAASLRPDVVIRPLAMDSAVITTYLLRPAGEDSPVSVERFIARLREHSGD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
bphR AAN62138.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 2e-99 76
bphR AAN62326.1 putative transcriptional regulator Not tested PAGI-3(SG) Protein 1e-46 41