|
Name : Daci_4190 (Daci_4190) Accession : YP_001565206.1 Strain : Delftia acidovorans SPH-1 Genome accession: NC_010002 Putative virulence/resistance : Unknown Product : relaxase Function : - COG functional category : - COG ID : - EC number : - Position : 4579413 - 4581266 bp Length : 1854 bp Strand : + Note : PFAM: protein of unknown function DUF1528; Relaxase; KEGG: xcv:XCV2356 hypothetical protein DNA sequence : ATGCTCTCTCTGTTCCAGCGGAAACGGCCTCCGGTCGCTGCCGCTCCGTCGCCAGCACCCGTCACCGATCTCCCGAAAGG GCTGCTGCAACCGGAATCGGCCGCATCGCTGCTGGCGACACCGCGCCGGCAGAAGCTGCTGGAACACATCTGGCAGCGAA CCTCGCTCTCGCGCAGGCAATTCGCCACCCTGTACCGCACGCCCCTGGAACGCTACGCCGAGCTGGTCCAGGCCTTCCCG GCCTCCGAGGCGCATCACCATGCCTACCCGGGAGGCATGCTCGACCACGGTCTCGAAATCGTCGCCTACAGCCTGAAGCT GCGGCAGTCCCATCTGCTGCCCATTGGCGCCAGTCCTGAGGACCAAGCGGCGCAGGAGGAAGCCTGGACCGCTGCAGTTG CCTATGCCGCGCTACTGCACGACGTCGGCAAGATCGCTGTCGATCTGCACGTCGAGCTAGCCGACGGCAATACCTGGCAT CCGTGGCACGGCCCGCTGCGTCAACCATACCGCTTCCGCTACCGTGACGATCGCGAGTACCGGCTCCACAGCGCCGCGAC AGGCTTGCTCTACCGGCAACTGCTTGACCGTGAAGTCCTGGATTGGCTCAGCTGCTATCCGTCGCTGTGGGCACCGCTGC TCTACGTCCTGGCCGGGCAGTACGAGCACGCTGGCGTGCTGGGCGAATTGGTGGTGCAGGCCGACCGTGCTTCCGTGGCC CAGGAACTGGGCGGCGACCCCACACGCGCCATGGCCGCGCCCAAGCACGCGCTGCAACGCAAGCTGCTGGAAGGGCTGCG TTACCTGCTCAAGGAGGAGCTGAAGCTGAACCAGCCCGAAGCCTCCGATGGCTGGCTCACCGATGGCGCGCTTTGGCTGG TGAGCAAGACAGTTTCCGACAAGCTGCGCGCGCACCTGCTGTCGCAGGGCGTTGACGGTATCCCGGCAAACAACACCGCC GTGTTCAACGTGCTGCAGGATCACGGCATGTTGCAGCCCACGCCGGACGGCAAAGCGATCTGGCGCGCTACCGTGACCAG TTCCACCGGCTGGACCCACTTGTTTACGTTGCTACGGCTGGCACCCGCGCTGATCTGGGAATCTGGTGAGCGACCAGCGC CCTTTGCCGGGACGGTGACGACCGACGCGGCACTGGCGGGCGAAGCTGCCGAGGCAGCGGCCACGCTTTCTGCGGACGGC GCAGCGTCCGCCTCCGAGAACCAAAACGCTCCGCCAGCGGAAGGTAGTGGCATCGTCTCGGCCTCTCCACCCAAGGCCCA GGCCAGCCCCGACGTCATGGCGGACATGCTGGCGATGGTGGGAATGGGGGATTCGTCAACCACCGAGGATGTGGAAACCG CCCCGGACGAAGTACCCGCAGCTCTCCCCGATGCGACCCAGCCGCCCTTGGCCGCCGCTGCGCCTTCGTCACCGGCCTTC ACGTCCTCGACGACACAGCCATCCGGCGAGCACTTCATGGCGTGGCTGAAACATGGCATCGCCACGCGGCGGCTCATCAT CAACGATGCGAAAGCGCTGGTGCATACCGTGAGCGACACCGCCTACCTGGTCAGCCCTGGCGTGTTCCAGCGCTATGCGC AGGAACACCCGCAGGTAGGCAAACTGGCCAAACAGGAGAACCTGCAGGATTGGCAGTGGGTGCAGAAGCGCTTCGAGCGA CTGCAATTGCATCGCAAGCAACCAAGTGGCCTGAACATCTGGACTTGCGAAGTCACAGGCGCCAGAAAATCGAGGAAGCT ACATGGCTATTTACTTATCAAACCAGAAATGGTTTTCGAATTTACGCCTCCAAATAACCCATATCTATTTTCAATGAAAT TTCCCGGCCTATGA Protein sequence : MLSLFQRKRPPVAAAPSPAPVTDLPKGLLQPESAASLLATPRRQKLLEHIWQRTSLSRRQFATLYRTPLERYAELVQAFP ASEAHHHAYPGGMLDHGLEIVAYSLKLRQSHLLPIGASPEDQAAQEEAWTAAVAYAALLHDVGKIAVDLHVELADGNTWH PWHGPLRQPYRFRYRDDREYRLHSAATGLLYRQLLDREVLDWLSCYPSLWAPLLYVLAGQYEHAGVLGELVVQADRASVA QELGGDPTRAMAAPKHALQRKLLEGLRYLLKEELKLNQPEASDGWLTDGALWLVSKTVSDKLRAHLLSQGVDGIPANNTA VFNVLQDHGMLQPTPDGKAIWRATVTSSTGWTHLFTLLRLAPALIWESGERPAPFAGTVTTDAALAGEAAEAAATLSADG AASASENQNAPPAEGSGIVSASPPKAQASPDVMADMLAMVGMGDSSTTEDVETAPDEVPAALPDATQPPLAAAAPSSPAF TSSTTQPSGEHFMAWLKHGIATRRLIINDAKALVHTVSDTAYLVSPGVFQRYAQEHPQVGKLAKQENLQDWQWVQKRFER LQLHRKQPSGLNIWTCEVTGARKSRKLHGYLLIKPEMVFEFTPPNNPYLFSMKFPGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF C36 | AAN62129.1 | conserved hypothetical protein | Not tested | PAGI-2(C) | Protein | 0.0 | 78 |
| ORF SG44 | AAN62266.1 | conserved hypothetical protein | Not tested | PAGI-3(SG) | Protein | 1e-180 | 68 |
| RL003 | AAP84130.1 | pathogenesis-related protein | Not tested | PAPI-1 | Protein | 4e-134 | 51 |
| EXA2 | ABD94612.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 4e-134 | 51 |
| unnamed | ABR13343.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 9e-134 | 50 |
