Gene Information

Name : Daci_4184 (Daci_4184)
Accession : YP_001565200.1
Strain : Delftia acidovorans SPH-1
Genome accession: NC_010002
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4574633 - 4576039 bp
Length : 1407 bp
Strand : +
Note : KEGG: rme:Rmet_2358 hypothetical protein

DNA sequence :
ATGAAGCGTCCTGAACTGACAAACCTCTCCACCAAGGCGTGCCGCCTGCTGCGTCCCACGGTATTGGCTGGGCTGCTGGC
TGGCGCACTCGTTCTTGGCGGCGGCCTGGCGTGGGCGCAGGCCGGATTTCAGACCGGCGGCTCCGTGATCGGCGACGAAG
TGATGTATTCGATTGGCGGCGGCAGCGCGGTGTCCATGGGCCGCGTGGCCGGCATGCGCTCGATCGGCGTTGGCGTGGGC
TGGAACAGCAACCTGATCTGCGGCGACATGAGCATCCAGACCACGCTGCGCAACCAGCTCAACGGCGTCACCAACGGCTT
TCAGCAGATCATGAGCAACGTGATCCAGAGCGCCACCAGCGCGGTGGCATCGCTGCCTGCGCTGATCATCCAGCGCGCCG
ATCCCGGCCTGTACAACCTGCTGACCAACGGCGTGCTGCAGGCGCGCCTGGATTTCGACCGATCCAAGCTGACCTGCCGT
GCCATGGCCGAGAAGATGGCCGACACGGCGGGCGGACAACTCGGCTGGAGCCAGATGGCCGAAGGCATGGCACTGCGCGA
TGCGGTGTCGAGCACGGATGCCGTGTCGGCAATTGAACAGGCGGAGACGCGCCGCGGCAACGACGGCGTGCCTTGGGTGG
GTGGTAGCAATGCGGGCGGCGCAGGCCAGTCGGCCATCCGCGTGGTCGGCGACGTCACCCGCGCAGGCTACAACCTGGTC
AACGGCCGCAGCGTGACCGACACATCGTCCATCGCTGCCGCCAGTTGCGCGAGTCTGTCTTGCCAGACCTGGACCTCGCC
ACAGCAGGCGACCGAATGGGCCACACGGGTTCTCGGCGAACAGGTGCAGCGCACTTGCGATGCCTGCACCAAGACCGAAA
CGGTGCCCGGCGTCGGGCTGACGCCGCTGATCCAGGAGGAGTACGAGGCAAAGCTGGAAGCCTTGCAGGAACTGGTCTCG
GGAACGCGCAACACCACCTTCGAGAACCTGCGTGCGGCTGGCAGCACCTCGCTGCCCATCACACGCGGCGTCATCGAGGC
GCTGCGCGACGAGCCGGATCAAGACCTGCTGGCGCGGCGCCTGGCCTCGGAGGTCGCGCTGGCGTCGGTGCTGGAGAAGG
CATTGCTGCTCCAGCGCACCCTGCTGACCGGCAAGAAGGAGCCCAACGTCGCGGCGAACCAGTTGGCGGTCGAGGCCGTG
AACCACGAGAGCGACACGCTCGACCAGGAAATCCGCAACCTCAAGACCGAGCTGGAGCTGCGCCGCGAGCTGGCGAACAA
CTCCCCCATGGCCATCATCCAGCGCCACGGCACGCGCGCGGCTGGCTCGCGTGGCATCTACGAAGGCGATCCCATTCCCG
ACCGCCTTGACCGGCTCCAGAAGGGCAATCCGGGAGGCAACCCATGA

Protein sequence :
MKRPELTNLSTKACRLLRPTVLAGLLAGALVLGGGLAWAQAGFQTGGSVIGDEVMYSIGGGSAVSMGRVAGMRSIGVGVG
WNSNLICGDMSIQTTLRNQLNGVTNGFQQIMSNVIQSATSAVASLPALIIQRADPGLYNLLTNGVLQARLDFDRSKLTCR
AMAEKMADTAGGQLGWSQMAEGMALRDAVSSTDAVSAIEQAETRRGNDGVPWVGGSNAGGAGQSAIRVVGDVTRAGYNLV
NGRSVTDTSSIAAASCASLSCQTWTSPQQATEWATRVLGEQVQRTCDACTKTETVPGVGLTPLIQEEYEAKLEALQELVS
GTRNTTFENLRAAGSTSLPITRGVIEALRDEPDQDLLARRLASEVALASVLEKALLLQRTLLTGKKEPNVAANQLAVEAV
NHESDTLDQEIRNLKTELELRRELANNSPMAIIQRHGTRAAGSRGIYEGDPIPDRLDRLQKGNPGGNP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C42 AAN62135.1 hypothetical protein Not tested PAGI-2(C) Protein 2e-179 91
ORF SG50 AAN62272.1 hypothetical protein Not tested PAGI-3(SG) Protein 1e-144 77
EXA19 ABD94628.1 conserved hypothetical protein Not tested ExoU island A Protein 2e-121 65
unnamed ABR13356.1 hypothetical protein Not tested PAGI-5 Protein 2e-119 65
pph90 CAI36131.1 hypothetical protein Not tested PPHGI-1 Protein 3e-128 64
RL016 AAP84143.1 putative pathogenesis-related protein Not tested PAPI-1 Protein 6e-121 64
unnamed AAX39459.1 unknown Not tested Hrp PAI Protein 2e-67 43
t4274 NP_807872.1 hypothetical protein Not tested SPI-7 Protein 2e-69 42
STY4577 NP_458662.1 hypothetical protein Not tested SPI-7 Protein 2e-69 42
api55 CAF28529.1 putative exported protein Not tested YAPI Protein 2e-68 42
YpsIP31758_3700 YP_001402654.1 hypothetical protein Not tested YAPI Protein 4e-68 42
YE3466 YP_001007627.1 hypothetical protein Not tested YAPI Protein 3e-68 42